Prospective Whole-Genome Sequencing Enhances National Surveillance of Listeria monocytogenes. (Q36521341)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26607978 AND SRC:MED&resulttype=core&format=json

1 March 2020

title

Prospective Whole-Genome Sequencing Enhances National Surveillance of Listeria monocytogenes (English)

1 reference

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1 March 2020

main subject

Listeria monocytogenes

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whole genome sequencing

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1

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1 March 2020

Dieter Bulach

6

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1 March 2020

Timothy Stinear

7

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1 March 2020

Torsten Seemann

8

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1 March 2020

Benjamin P. Howden

9

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1 March 2020

2

Karolina Mercoulia

1 reference

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1 March 2020

4

Marion Easton

1 reference

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1 March 2020

author name string

Takehiro Tomita

3

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1 March 2020

Hua Y Li

5

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1 March 2020

language of work or name

English

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publication date

25 November 2015

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Journal of Clinical Microbiology

1 March 2020

published in

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1 March 2020

volume

54

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issue

2

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1 March 2020

page(s)

333-342

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Best practices for evaluating single nucleotide variant calling methods for microbial genomics

1 March 2020

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1 reference

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Choice of reference sequence and assembler for alignment of Listeria monocytogenes short-read sequence data greatly influences rates of error in SNP analyses

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Genome sequencing of Listeria monocytogenes "Quargel" listeriosis outbreak strains reveals two different strains with distinct in vitro virulence potential

30 September 2017

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Genomic characterization of novel Listeria monocytogenes serotype 4b variant strains

30 September 2017

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Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Escherichia coli

30 September 2017

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Rapid bacterial whole-genome sequencing to enhance diagnostic and public health microbiology

30 September 2017

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Identification of an optimized panel of variable number tandem-repeat (VNTR) loci for Listeria monocytogenes typing.

30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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Application of phylogenetic networks in evolutionary studies

30 September 2017

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Differentiation of the major Listeria monocytogenes serovars by multiplex PCR.

30 September 2017

1 reference

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eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data

30 September 2017

1 reference

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DNA polymorphism in strains of Listeria monocytogenes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4733179

Hierarchical and spatially explicit clustering of DNA sequences with BAPS software

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4733179

Multistate outbreak of listeriosis associated with cantaloupe

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4733179

Informed and automated k-mer size selection for genome assembly

28 June 2018

1 reference

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Multiple-locus variable-number tandem-repeats analysis of Listeria monocytogenes using multicolour capillary electrophoresis and comparison with pulsed-field gel electrophoresis typing.

21 September 2018

1 reference

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Prolonged hospital and community-based listeriosis outbreak caused by ready-to-eat scalded sausages

21 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26607978

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Real-time digital pathogen surveillance - the time is now.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26607978

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/JCM.02344-15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26607978 AND SRC:MED&resulttype=core&format=json

1 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26607978 AND SRC:MED&resulttype=core&format=json

1 March 2020

PubMed publication ID

26607978

1 reference