Position-dependent splicing activation and repression by SR and hnRNP proteins rely on common mechanisms. (Q36481243)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23175589 AND SRC:MED&resulttype=core&format=json

18 February 2020

title

Position-dependent splicing activation and repression by SR and hnRNP proteins rely on common mechanisms (English)

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18 February 2020

6

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18 February 2020

author name string

Steffen Erkelenz

1

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18 February 2020

William F Mueller

2

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18 February 2020

Melanie S Evans

3

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18 February 2020

Anke Busch

4

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18 February 2020

Katrin Schöneweis

5

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18 February 2020

Heiner Schaal

7

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18 February 2020

language of work or name

English

0 references

publication date

21 November 2012

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18 February 2020

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18 February 2020

volume

19

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18 February 2020

issue

1

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18 February 2020

page(s)

96-102

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Frequent gain and loss of intronic splicing regulatory elements during the evolution of vertebrates

18 February 2020

cites work

1 reference

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Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins

30 September 2017

1 reference

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A U1-U2 snRNP interaction network during intron definition

30 September 2017

1 reference

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Multi-domain conformational selection underlies pre-mRNA splicing regulation by U2AF

30 September 2017

1 reference

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Interaction between the RNA binding domains of Ser-Arg splicing factor 1 and U1-70K snRNP protein determines early spliceosome assembly

30 September 2017

1 reference

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G Run-mediated recognition of proteolipid protein and DM20 5' splice sites by U1 small nuclear RNA is regulated by context and proximity to the splice site.

30 September 2017

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Human SAP18 mediates assembly of a splicing regulatory multiprotein complex via its ubiquitin-like fold

30 September 2017

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Position-dependent alternative splicing activity revealed by global profiling of alternative splicing events regulated by PTB.

30 September 2017

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Competing upstream 5' splice sites enhance the rate of proximal splicing

30 September 2017

1 reference

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Context-dependent regulatory mechanism of the splicing factor hnRNP L.

30 September 2017

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Expansion of the eukaryotic proteome by alternative splicing

30 September 2017

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Isoforms of U1-70k control subunit dynamics in the human spliceosomal U1 snRNP

30 September 2017

1 reference

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The spliceosome: design principles of a dynamic RNP machine

30 September 2017

1 reference

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Spliceosome assembly pathways for different types of alternative splicing converge during commitment to splice site pairing in the A complex.

30 September 2017

1 reference

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SR proteins and related factors in alternative splicing.

30 September 2017

1 reference

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Downstream intronic splicing enhancers

30 September 2017

1 reference

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The strength of the HIV-1 3' splice sites affects Rev function.

30 September 2017

1 reference

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Alternative splicing: new insights from global analyses

30 September 2017

1 reference

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HnRNP L represses exon splicing via a regulated exonic splicing silencer

30 September 2017

1 reference

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Serine/arginine-rich protein-dependent suppression of exon skipping by exonic splicing enhancers

30 September 2017

1 reference

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A bidirectional SF2/ASF- and SRp40-dependent splicing enhancer regulates human immunodeficiency virus type 1 rev, env, vpu, and nef gene expression

30 September 2017

1 reference

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Mechanisms of alternative pre-messenger RNA splicing

30 September 2017

1 reference

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The splicing regulator TIA-1 interacts with U1-C to promote U1 snRNP recruitment to 5' splice sites

30 September 2017

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The human genome browser at UCSC

30 September 2017

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A second exon splicing silencer within human immunodeficiency virus type 1 tat exon 2 represses splicing of Tat mRNA and binds protein hnRNP H.

30 September 2017

1 reference

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The sequence complementarity between HIV-1 5' splice site SD4 and U1 snRNA determines the steady-state level of an unstable env pre-mRNA.

30 September 2017

1 reference

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Sorting out the complexity of SR protein functions

30 September 2017

1 reference

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Resolution of the mammalian E complex and the ATP-dependent spliceosomal complexes on native agarose mini-gels

30 September 2017

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The splicing factors 9G8 and SRp20 transactivate splicing through different and specific enhancers.

30 September 2017

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Binding of hnRNP H to an exonic splicing silencer is involved in the regulation of alternative splicing of the rat beta-tropomyosin gene

30 September 2017

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Inhibition by SR proteins of splicing of a regulated adenovirus pre-mRNA.

30 September 2017

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Individual RNA recognition motifs of TIA-1 and TIAR have different RNA binding specificities

30 September 2017

1 reference

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hnRNP proteins and the biogenesis of mRNA

30 September 2017

1 reference

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The 35-kDa mammalian splicing factor SC35 mediates specific interactions between U1 and U2 small nuclear ribonucleoprotein particles at the 3' splice site

30 September 2017

1 reference

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Dynamic regulation of alternative splicing by silencers that modulate 5' splice site competition

30 September 2017

1 reference

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Distinct functions of the closely related tandem RNA-recognition motifs of hnRNP A1.

28 June 2018

1 reference

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Electrophoretic separation of complexes involved in the splicing of precursors to mRNAs

28 June 2018

1 reference

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An RNA map predicting Nova-dependent splicing regulation

28 June 2018

1 reference

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U1-like snRNAs lacking complementarity to canonical 5' splice sites.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527730

Analyzing mechanisms of alternative pre-mRNA splicing using in vitro splicing assays.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527730

Members of the heterogeneous nuclear ribonucleoprotein H family activate splicing of an HIV-1 splicing substrate by promoting formation of ATP-dependent spliceosomal complexes

21 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23175589

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1261/RNA.037044.112

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23175589 AND SRC:MED&resulttype=core&format=json

18 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23175589 AND SRC:MED&resulttype=core&format=json

18 February 2020

PubMed publication ID

23175589

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23175589 AND SRC:MED&resulttype=core&format=json