Analysis of protein binding sites by computational solvent mapping (Q36478348)

14 August 2017

Analysis of protein binding sites by computational solvent mapping (English)

1 reference

14 August 2017

computational biology

1 reference

Dima Kozakov

2

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Sandor Vajda

object named as

Sandor Vajda

series ordinal

3

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author name string

David R Hall

series ordinal

1

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PMC publication ID

3526383

14 August 2017

language of work or name

English

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publication date

1 January 2012

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Methods in Molecular Biology

14 August 2017

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14 August 2017

819

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14 August 2017

13-27

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Binding hot spots and amantadine orientation in the influenza a virus M2 proton channel

14 August 2017

1 reference

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The structural basis of pregnane X receptor binding promiscuity

30 September 2017

1 reference

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Detection of ligand binding hot spots on protein surfaces via fragment-based methods: application to DJ-1 and glucocerebrosidase

30 September 2017

1 reference

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Fragment-based identification of druggable 'hot spots' of proteins using Fourier domain correlation techniques

30 September 2017

1 reference

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Novel druggable hot spots in avian influenza neuraminidase H5N1 revealed by computational solvent mapping of a reduced and representative receptor ensemble.

30 September 2017

1 reference

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Application of fragment screening by X-ray crystallography to the discovery of aminopyridines as inhibitors of beta-secretase

30 September 2017

1 reference

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Application of fragment screening by X-ray crystallography to beta-secretase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3526383

Characterization of protein-ligand interaction sites using experimental and computational methods

30 September 2017

1 reference

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Predicting protein druggability

30 September 2017

1 reference

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Druggability indices for protein targets derived from NMR-based screening data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3526383

Computational mapping identifies the binding sites of organic solvents on proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3526383

Experimental and computational mapping of the binding surface of a crystalline protein

30 September 2017

1 reference

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Locating interaction sites on proteins: the crystal structure of thermolysin soaked in 2% to 100% isopropanol

30 September 2017

1 reference

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Locating and characterizing binding sites on proteins

30 September 2017

1 reference

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A hot spot of binding energy in a hormone-receptor interface

30 September 2017

1 reference

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Identification of hot spots within druggable binding regions by computational solvent mapping of proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3526383

Multiple solvent crystal structures: probing binding sites, plasticity and hydration

21 September 2018

1 reference

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Identification of substrate binding sites in enzymes by computational solvent mapping.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3526383

10.1007/978-1-61779-465-0_2

21 September 2018

Identifiers

DOI

1 reference

14 August 2017

1 reference

PMC publication ID

3526383

14 August 2017

PubMed publication ID

22183527

1 reference

PMC publication ID

3526383