Facilitated distortion of the DNA site enhances EcoRI endonuclease-DNA recognition (Q36477020)

14 August 2017

Facilitated distortion of the DNA site enhances EcoRI endonuclease-DNA recognition (English)

1 reference

14 August 2017

D R Lesser

1

1 reference

14 August 2017

M R Kurpiewski

2

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14 August 2017

T Waters

3

1 reference

14 August 2017

B A Connolly

4

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14 August 2017

L Jen-Jacobson

5

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14 August 2017

language of work or name

English

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publication date

1 August 1993

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14 August 2017

5

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Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

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14 August 2017

90

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14 August 2017

16

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14 August 2017

7548-7552

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Refinement of the solution structure of the DNA dodecamer 5'd(CGCGPATTCGCG)2 containing a stable purine-thymine base pair: combined use of nuclear magnetic resonance and restrained molecular dynamics

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

DNA twisting and the affinity of bacteriophage 434 operator for bacteriophage 434 repressor

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

Recognition of a DNA operator by the repressor of phage 434: a view at high resolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

The effects of base analogue substitutions on the cleavage by the EcoRI restriction endonuclease of octadeoxyribonucleotides containing modified EcoRI recognition sequences

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

The enfolding arms of EcoRI endonuclease: role in DNA binding and cleavage

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

Role of the hydrophobic effect in stability of site-specific protein-DNA complexes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

Refinement of Eco RI endonuclease crystal structure: a revised protein chain tracing

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

The highly homologous isoschizomers RsrI endonuclease and EcoRI endonuclease do not recognize their target sequence identically

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

Stereoselective interaction with chiral phosphorothioates at the central DNA kink of the EcoRI endonuclease-GAATTC complex

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

DNA curvature in native and modified EcoRI recognition sites and possible influence upon the endonuclease cleavage reaction

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

The energetic basis of specificity in the Eco RI endonuclease--DNA interaction.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

Analysis of local helix geometry in three B-DNA decamers and eight dodecamers

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

Stacking energies in DNA.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

16 Analysis of equilibrium and kinetic measurements to determine thermodynamic origins of stability and specificity and mechanism of formation of site-specific complexes between proteins and helical DNA

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

EcoRI DNA methyltransferase-DNA interactions

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=47179

DNA determinants important in sequence recognition by Eco RI endonuclease

28 June 2018

1 reference

12 December 2020

Thermodynamic origins of specificity in the lac repressor-operator interaction. Adaptability in the recognition of mutant operator sites

1 reference

12 December 2020

Effects of functional group changes in the EcoRI recognition site on the cleavage reaction catalyzed by the endonuclease

1 reference

12 December 2020

Synthetic oligodeoxynucleotides containing modified bases

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.90.16.7548

1 reference

14 August 2017

0 references

1 reference

14 August 2017

PubMed publication ID

8356054

1 reference