DNA arms do the legwork to ensure the directionality of lambda site-specific recombination (Q36348044)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

14 January 2020

review article

1 reference

title

DNA arms do the legwork to ensure the directionality of lambda site-specific recombination (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

14 January 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

14 January 2020

author name string

Tapan Biswas

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

14 January 2020

Tom Ellenberger

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

14 January 2020

Arthur Landy

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

14 January 2020

Hideki Aihara

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

14 January 2020

publication date

20 December 2005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

Current Opinion in Structural Biology

14 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

14 January 2020

volume

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

14 January 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

14 January 2020

page(s)

42-50

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

A structural basis for allosteric control of DNA recombination by lambda integrase.

14 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Architecture of recombination intermediates visualized by in-gel FRET of lambda integrase-Holliday junction-arm DNA complexes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Mutations in the amino-terminal domain of lambda-integrase have differential effects on integrative and excisive recombination

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Two structural features of lambda integrase that are critical for DNA cleavage by multimers but not by monomers

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Reversible inhibitors of lambda integrase-mediated recombination efficiently trap Holliday junction intermediates and form the basis of a novel assay for junction resolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

A conformational switch controls the DNA cleavage activity of lambda integrase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Identification of the lambda integrase surface that interacts with Xis reveals a residue that is also critical for Int dimer formation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Arm sequences contribute to the architecture and catalytic function of a lambda integrase-Holliday junction complex.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

New insight into site-specific recombination from Flp recombinase-DNA structures

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Regulation of site-specific recombination by the C-terminus of lambda integrase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Arm-site binding by lambda -integrase: solution structure and functional characterization of its amino-terminal domain

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

A structural view of cre-loxp site-specific recombination

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

The small DNA binding domain of lambda integrase is a context-sensitive modulator of recombinase functions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Crystal structure of a Flp recombinase-Holliday junction complex: assembly of an active oligomer by helix swapping

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Flexibility in DNA recombination: structure of the lambda integrase catalytic core

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Site-specific recombination functions of bacteriophage lambda: DNA sequence of regulatory regions and overlapping structural genes for Int and Xis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Patterns of lambda Int recognition in the regions of strand exchange

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Bacteriophage lambda int protein recognizes two classes of sequence in the phage att site: characterization of arm-type sites

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

An intermediate in the phage lambda site-specific recombination reaction is revealed by phosphorothioate substitution in DNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Mutations in an integration host factor-binding site: effect on lambda site-specific recombination and regulatory implications

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Multiple effects of Fis on integration and the control of lysogeny in phage lambda

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Efficient excision of phage lambda from the Escherichia coli chromosome requires the Fis protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

FIS-dependent trans activation of stable RNA operons of Escherichia coli under various growth conditions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Dramatic changes in Fis levels upon nutrient upshift in Escherichia coli

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Integrative recombination of bacteriophage lambda DNA in vitro

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Receipt of the C-terminal tail from a neighboring lambda Int protomer allosterically stimulates Holliday junction resolution.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Transposition and site-specific recombination: adapting DNA cut-and-paste mechanisms to a variety of genetic rearrangements

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Bacteriophage lambda site-specific recombination proceeds with a defined order of strand exchanges

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Synapsis of attachment sites during lambda integrative recombination involves capture of a naked DNA by a protein-DNA complex

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Cellular factors couple recombination with growth phase: characterization of a new component in the lambda site-specific recombination pathway.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Control of directionality in lambda site specific recombination

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Autonomous DNA binding domains of lambda integrase recognize two different sequence families

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

DNA looping generated by DNA bending protein IHF and the two domains of lambda integrase

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

The efficiency of mispaired ligations by lambda integrase is extremely sensitive to context

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Dynamics and DNA substrate recognition by the catalytic domain of lambda integrase

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Attenuating functions of the C terminus of lambda integrase

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

Mapping the functional domains of bacteriophage lambda integrase protein

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892226

The molecular basis of co‐operative DNA binding between lambda integrase and excisionase

22 September 2018

1 reference

12 December 2020

Site-specific recombination Xis-independent excisive recombination of bacteriophage lambda

1 reference

12 December 2020

Purification of the bacteriophage lambda xis gene product required for lambda excisive recombination

1 reference

12 December 2020

Role of the Xis protein of bacteriophage λ in a specific reactive complex at the attR prophage attachment site

1 reference

12 December 2020

Site-specific recombination intermediates trapped with suicide substrates

1 reference

12 December 2020

Protein-protein interactions in a higher-order structure direct lambda site-specific recombination

1 reference

12 December 2020

Suicide recombination substrates yield covalent lambda integrase-DNA complexes and lead to identification of the active site tyrosine

1 reference

12 December 2020

DNA cleavage in trans by the active site tyrosine during Flp recombination: Switching protein partners before exchanging strands

1 reference

12 December 2020

Non-equivalent interactions between amino-terminal domains of neighboring lambda integrase protomers direct Holliday junction resolution

1 reference

12 December 2020

Dissection of bacteriophage lambda site-specific recombination using synthetic peptide combinatorial libraries

1 reference

12 December 2020

10.1016/J.SBI.2005.12.003

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

release_6l6pd7lknvav5onxrssti5osj4

14 January 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/6l6pd7lknvav5onxrssti5osj4

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16368232 AND SRC:MED&resulttype=core&format=json

14 January 2020

PubMed publication ID

16368232

1 reference