GuideScan software for improved single and paired CRISPR guide RNA design (Q36298067)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28263296 AND SRC:MED&resulttype=core&format=json

4 April 2020

title

GuideScan software for improved single and paired CRISPR guide RNA design (English)

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4 April 2020

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3

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4 April 2020

Sagar Chhangawala

4

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4 April 2020

6

Christina S Leslie

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4 April 2020

author name string

Alexendar R Perez

1

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4 April 2020

Yuri Pritykin

2

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4 April 2020

Lee Zamparo

5

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4 April 2020

Andrea Ventura

7

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4 April 2020

publication date

6 March 2017

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4 April 2020

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4 April 2020

volume

35

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4 April 2020

issue

4

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4 April 2020

page(s)

347-349

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High-throughput mapping of regulatory DNA.

4 April 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Functional genetic screens for enhancer elements in the human genome using CRISPR-Cas9.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

BCL11A enhancer dissection by Cas9-mediated in situ saturating mutagenesis

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

CRISPRscan: designing highly efficient sgRNAs for CRISPR-Cas9 targeting in vivo

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Rapid and efficient one-step generation of paired gRNA CRISPR-Cas9 libraries

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

"Off-Spotter": very fast and exhaustive enumeration of genomic lookalikes for designing CRISPR/Cas guide RNAs

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Enhanced homology-directed human genome engineering by controlled timing of CRISPR/Cas9 delivery

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Genome editing. The new frontier of genome engineering with CRISPR-Cas9

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

In vivo engineering of oncogenic chromosomal rearrangements with the CRISPR/Cas9 system.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Development and applications of CRISPR-Cas9 for genome engineering

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Genome-wide recessive genetic screening in mammalian cells with a lentiviral CRISPR-guide RNA library

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Improving CRISPR-Cas nuclease specificity using truncated guide RNAs

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Genome-scale CRISPR-Cas9 knockout screening in human cells

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Genetic screens in human cells using the CRISPR-Cas9 system

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

DNA targeting specificity of RNA-guided Cas9 nucleases

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Master transcription factors and mediator establish super-enhancers at key cell identity genes

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

GENCODE: the reference human genome annotation for The ENCODE Project

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

An integrated encyclopedia of DNA elements in the human genome

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

miRBase: integrating microRNA annotation and deep-sequencing data

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

The Sequence Alignment/Map format and SAMtools

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

E-CRISP: fast CRISPR target site identification

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5607865

Genome-scale deletion screening of human long non-coding RNAs using a paired-guide RNA CRISPR-Cas9 library

22 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038/NBT.3804

Genomic Copy Number Dictates a Gene-Independent Cell Response to CRISPR/Cas9 Targeting

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038/NBT.3804

21 January 2018

Identifiers

DOI

10.1038/NBT.3804

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28263296 AND SRC:MED&resulttype=core&format=json

4 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28263296 AND SRC:MED&resulttype=core&format=json

4 April 2020

PubMed publication ID

28263296

1 reference