Systematic Mapping of RNA-Chromatin Interactions In&#160;Vivo. (Q36263400)

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9 April 2020

title

Systematic Mapping of RNA-Chromatin Interactions In Vivo (English)

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9 April 2020

6

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9 April 2020

Zhangming Yan

5

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9 April 2020

author name string

Bharat Sridhar

1

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9 April 2020

Marcelo Rivas-Astroza

2

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9 April 2020

Tri C Nguyen

3

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9 April 2020

Weizhong Chen

4

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9 April 2020

Lucie Hebert

7

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9 April 2020

Sheng Zhong

8

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9 April 2020

language of work or name

English

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publication date

26 January 2017

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9 April 2020

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9 April 2020

volume

27

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9 April 2020

issue

4

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9 April 2020

page(s)

602-609

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Progressive Chromatin Condensation and H3K9 Methylation Regulate the Differentiation of Embryonic and Hematopoietic Stem Cells

9 April 2020

cites work

1 reference

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UpSet: Visualization of Intersecting Sets.

29 June 2018

1 reference

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Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

The long noncoding RNAs NEAT1 and MALAT1 bind active chromatin sites

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Chromatin decondensation and nuclear softening accompany Nanog downregulation in embryonic stem cells

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Df31 Protein and snoRNAs Maintain Accessible Higher-Order Structures of Chromatin

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Epigenetics in alternative pre-mRNA splicing

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Ftx is a non-coding RNA which affects Xist expression and chromatin structure within the X-inactivation center region

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Model-based analysis of ChIP-Seq (MACS)

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

X-inactivation in female human embryonic stem cells is in a nonrandom pattern and prone to epigenetic alterations

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Xist RNA and the mechanism of X chromosome inactivation

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Identification of TSIX, encoding an RNA antisense to human XIST, reveals differences from its murine counterpart: implications for X inactivation

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Tsix, a gene antisense to Xist at the X-inactivation centre

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Targeted ribose methylation of RNA in vivo directed by tailored antisense RNA guides

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

A tandem affinity tag for two-step purification under fully denaturing conditions: application in ubiquitin profiling and protein complex identification combined with in vivocross-linking

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

Structure-function analysis of T4 RNA ligase 2.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5319903

10.1016/J.CUB.2017.01.011

22 September 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28132817 AND SRC:MED&resulttype=core&format=json

9 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28132817 AND SRC:MED&resulttype=core&format=json

9 April 2020

PubMed publication ID

28132817

1 reference