Processing Oscillatory Signals by Incoherent Feedforward Loops (Q36131481)

12 August 2017

Processing Oscillatory Signals by Incoherent Feedforward Loops (English)

1 reference

12 August 2017

Carolyn Zhang

1

1 reference

12 August 2017

Ryan Tsoi

series ordinal

2

1 reference

12 August 2017

Feilun Wu

series ordinal

3

1 reference

12 August 2017

Lingchong You

series ordinal

4

1 reference

12 August 2017

13 September 2016

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PLOS Computational Biology

12 August 2017

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12 August 2017

12

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12 August 2017

9

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12 August 2017

e1005101

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Creative Commons Attribution 4.0 International

12 August 2017

start time

13 September 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Frequency modulation of ERK activation dynamics rewires cell fate

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Accurate encoding and decoding by single cells: amplitude versus frequency modulation

2 October 2017

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cAMP-responsive element-binding protein (CREB) and cAMP co-regulate activator protein 1 (AP1)-dependent regeneration-associated gene expression and neurite growth

2 October 2017

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Computational analysis of signaling patterns in single cells

2 October 2017

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Ultradian oscillations and pulses: coordinating cellular responses and cell fate decisions

2 October 2017

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Logarithmic and power law input-output relations in sensory systems with fold-change detection

2 October 2017

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Dynamic expression and roles of Hes factors in neural development.

2 October 2017

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Myc and cell cycle control.

2 October 2017

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Nucleocytoplasmic shuttling of a GATA transcription factor functions as a development timer.

2 October 2017

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Fold change of nuclear NF-κB determines TNF-induced transcription in single cells

2 October 2017

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Functional roles of pulsing in genetic circuits

2 October 2017

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Stochastic ERK activation induced by noise and cell-to-cell propagation regulates cell density-dependent proliferation

2 October 2017

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Encoding and decoding cellular information through signaling dynamics

2 October 2017

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The utility of paradoxical components in biological circuits

2 October 2017

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Frequency-modulated pulses of ERK activity transmit quantitative proliferation signals

2 October 2017

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p53 dynamics control cell fate

2 October 2017

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Activation of Ras/PI3K/ERK pathway induces c-Myc stabilization to upregulate argininosuccinate synthetase, leading to arginine deiminase resistance in melanoma cells

2 October 2017

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Histone demethylase KDM5B collaborates with TFAP2C and Myc to repress the cell cycle inhibitor p21(cip) (CDKN1A).

2 October 2017

1 reference

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Stimulus-dependent dynamics of p53 in single cells

2 October 2017

1 reference

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Impulse Control: Temporal Dynamics in Gene Transcription

2 October 2017

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Single-cell NF-kappaB dynamics reveal digital activation and analogue information processing.

2 October 2017

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A synchronized quorum of genetic clocks

2 October 2017

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NFIL3 and cAMP response element-binding protein form a transcriptional feedforward loop that controls neuronal regeneration-associated gene expression

2 October 2017

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The incoherent feedforward loop can provide fold-change detection in gene regulation

2 October 2017

1 reference

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Rapid and sustained nuclear-cytoplasmic ERK oscillations induced by epidermal growth factor

2 October 2017

1 reference

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Defining network topologies that can achieve biochemical adaptation.

2 October 2017

1 reference

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An externally tunable bacterial band-pass filter.

2 October 2017

1 reference

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Synthetic gene networks that count

2 October 2017

1 reference

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Protein sequestration generates a flexible ultrasensitive response in a genetic network

2 October 2017

1 reference

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Pulsatile stimulation determines timing and specificity of NF-kappaB-dependent transcription

2 October 2017

1 reference

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The c-MYC-AP4-p21 cascade

2 October 2017

1 reference

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Simple molecular networks that respond optimally to time-periodic stimulation

2 October 2017

1 reference

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Design principles of biochemical oscillators

2 October 2017

1 reference

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Molecular titration and ultrasensitivity in regulatory networks.

2 October 2017

1 reference

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Sensing and integration of Erk and PI3K signals by Myc

2 October 2017

1 reference

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The dark side of a tumor suppressor: anti-apoptotic p53.

2 October 2017

1 reference

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Noise-limited frequency signal transmission in gene circuits.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Cell-signalling dynamics in time and space

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

A TNF-induced gene expression program under oscillatory NF-kappaB control

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Stimulus specificity of gene expression programs determined by temporal control of IKK activity

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Circadian rhythms from multiple oscillators: lessons from diverse organisms

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Ultrasensitivity and noise propagation in a synthetic transcriptional cascade.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Structure and function of the feed-forward loop network motif

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Engineered gene circuits.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Myc represses the p21(WAF1/CIP1) promoter and interacts with Sp1/Sp3.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Calcium oscillations increase the efficiency and specificity of gene expression

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

An amplified sensitivity arising from covalent modification in biological systems

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Cyclic-AMP-controlled oscillations in suspended Dictyostelium cells: their relation to morphogenetic cell interactions

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Oscillatory control of factors determining multipotency and fate in mouse neural progenitors

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Genetic regulatory networks that count to 3.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

A fast, robust and tunable synthetic gene oscillator.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

The biphasic behavior of incoherent feed-forward loops in biomolecular regulatory networks

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Periodic signaling controlled by an oscillatory circuit that includes protein kinases ERK2 and PKA.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5021367

Myc suppression of the p21 Cip1 Cdk inhibitor influences the outcome of the p53 response to DNA damage

23 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PCBI.1005101

10.1371/JOURNAL.PCBI.1005101

21 January 2018

Identifiers

DOI

1 reference

journals/ploscb/ZhangTWY16

12 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

12 August 2017

PubMed publication ID

27623175

1 reference