Engineering rotor ring stoichiometries in the ATP synthase (Q36056515)

11 August 2017

Engineering rotor ring stoichiometries in the ATP synthase (English)

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11 August 2017

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Denys Pogoryelov

1

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11 August 2017

Adriana L Klyszejko

2

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11 August 2017

Ganna O Krasnoselska

3

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11 August 2017

Eva-Maria Heller

4

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11 August 2017

Vanessa Leone

5

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11 August 2017

Julian D Langer

6

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11 August 2017

Janet Vonck

7

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11 August 2017

Daniel J Müller

8

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11 August 2017

José D Faraldo-Gómez

9

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11 August 2017

Thomas Meier

10

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11 August 2017

language of work or name

English

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publication date

24 May 2012

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Proceedings of the National Academy of Sciences of the United States of America

11 August 2017

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11 August 2017

109

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11 August 2017

25

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11 August 2017

E1599-608

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

11 August 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

GRIFFIN: A versatile methodology for optimization of protein-lipid interfaces for membrane protein simulations.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Promiscuous archaeal ATP synthase concurrently coupled to Na and H translocation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Microscopic rotary mechanism of ion translocation in the F(o) complex of ATP synthases

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

ATP synthase: from sequence to ring size to the P/O ratio

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Bioenergetic cost of making an adenosine triphosphate molecule in animal mitochondria

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

A new type of proton coordination in an F(1)F(o)-ATP synthase rotor ring

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

High-resolution structure of the rotor ring of a proton-dependent ATP synthase

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Complete ion-coordination structure in the rotor ring of Na -dependent F-ATP synthases

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Essentials for ATP synthesis by F1F0 ATP synthases

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Torque generation and elastic power transmission in the rotary F(O)F(1)-ATPase.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

The c13 ring from a thermoalkaliphilic ATP synthase reveals an extended diameter due to a special structural region.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Functional asymmetry of the F(0) motor in bacterial ATP synthases

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Characterization of the Functionally Critical AXAXAXA and PXXEXXP Motifs of the ATP Synthase c-Subunit from an Alkaliphilic Bacillus

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Arginine-induced conformational change in the c-ring/a-subunit interface of ATP synthase

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

An intermediate step in the evolution of ATPases: a hybrid F(0)-V(0) rotor in a bacterial Na( ) F(1)F(0) ATP synthase

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

The thermodynamic H /ATP ratios of the H -ATPsynthases from chloroplasts and Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

The product of uncI gene in F1Fo-ATP synthase operon plays a chaperone-like role to assist c-ring assembly

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Dodecamer rotor ring defines H /ATP ratio for ATP synthesis of prokaryotic V-ATPase from Thermus thermophilus.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Chemomechanical coupling in single-molecule F-type ATP synthase

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Scalable molecular dynamics with NAMD

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

The c15 ring of the Spirulina platensis F-ATP synthase: F1/F0 symmetry mismatch is not obligatory

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Thermophilic ATP synthase has a decamer c-ring: indication of noninteger 10:3 H /ATP ratio and permissive elastic coupling

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

The CCP4 suite: programs for protein crystallography

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Extending the treatment of backbone energetics in protein force fields: limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Sodium ion cycling mediates energy coupling between complex I and ATP synthase

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Complete DNA sequence of the atp operon of the sodium-dependent F1Fo ATP synthase from Ilyobacter tartaricus and identification of the encoded subunits

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Intersubunit bridging by Na ions as a rationale for the unusual stability of the c-rings of Na -translocating F1F0 ATP synthases

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Molecular architecture of the undecameric rotor of a bacterial Na -ATP synthase

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

ATP synthase: constrained stoichiometry of the transmembrane rotor.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

The Calpha ---H...O hydrogen bond: a determinant of stability and specificity in transmembrane helix interactions

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

The preferred stoichiometry of c subunits in the rotary motor sector of Escherichia coli ATP synthase is 10.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Bacterial Na( )-ATP synthase has an undecameric rotor

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

EMAN: semiautomated software for high-resolution single-particle reconstructions

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Molecular architecture of the rotary motor in ATP synthase

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

ATP synthesis by F-type ATP synthase is obligatorily dependent on the transmembrane voltage

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Purification and properties of the F1F0 ATPase of Ilyobacter tartaricus, a sodium ion pump.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Solution structure of the transmembrane H -transporting subunit c of the F1F0 ATP synthase

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Effects of carbon source on expression of F0 genes and on the stoichiometry of the c subunit in the F1F0 ATPase of Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

The ATP synthase--a splendid molecular machine

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

A transmembrane helix dimer: structure and implications

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Direct observation of the rotation of F1-ATPase

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

A new generation of the IMAGIC image processing system

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

MRC image processing programs

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Structure at 2.8 A resolution of F1-ATPase from bovine heart mitochondria

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

The effects of an atpE ribosome-binding site mutation on the stoichiometry of the c subunit in the F1F0 ATPase of Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

In vivo evidence for the role of the epsilon subunit as an inhibitor of the proton-translocating ATPase of Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3382517

Structure of the rotor ring of F-Type Na -ATPase from Ilyobacter tartaricus

11 July 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1120027109

The effect of point mutations on the free energy of transmembrane α-helix dimerization

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1120027109

The oligomeric state of c rings from cyanobacterial F-ATP synthases varies from 13 to 15.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1120027109

Probing the rotor subunit interface of the ATP synthase from Ilyobacter tartaricus

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1120027109

Constant c10 ring stoichiometry in the Escherichia coli ATP synthase analyzed by cross-linking

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1120027109

The stoichiometry of subunit c of Escherichia coli ATP synthase is independent of its rate of synthesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1120027109

Self-assembly of ATP synthase subunit c rings.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1120027109

Atomic force microscopy and spectroscopy of native membrane proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1120027109

Structural and energetic basis for H versus Na binding selectivity in ATP synthase Fo rotors

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1120027109

A hybrid adenosinetriphosphatase composed of F1 of Escherichia coli and F0 of Propionigenium modestum is a functional sodium ion pump

21 January 2018

1 reference

12 December 2020

The central plug in the reconstituted undecameric c cylinder of a bacterial ATP synthase consists of phospholipids

1 reference

12 December 2020

Structural evidence for a constant c11 ring stoichiometry in the sodium F-ATP synthase

1 reference

12 December 2020

A tridecameric c ring of the adenosine triphosphate (ATP) synthase from the thermoalkaliphilic Bacillus sp. strain TA2.A1 facilitates ATP synthesis at low electrochemical proton potential

1 reference

12 December 2020

Genetic fusions of subunit c in the F0 sector of H -transporting ATP synthase. Functional dimers and trimers and determination of stoichiometry by cross-linking analysis

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.1120027109

1 reference

11 August 2017

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1 reference

11 August 2017

PubMed publication ID

22628564

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