Evidence for gene-gene epistatic interactions among susceptibility loci for systemic lupus erythematosus (Q35713249)

9 August 2017

title

Evidence for gene-gene epistatic interactions among susceptibility loci for systemic lupus erythematosus (English)

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systemic lupus erythematosus

9 August 2017

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Elena Sanchez

16

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Jennifer A Kelly

Jennifer A Kelly

3

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Timothy B. Niewold

Timothy B Niewold

18

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Robert P. Kimberly

Robert P Kimberly

9

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Marta E Alarcón-Riquelme

Marta E Alarcón-Riquelme

30

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Javier Martin

Javier Martín

17

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Timothy Vyse

29

Timothy J Vyse

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John D Reveille

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Michelle Petri

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32

John B Harley

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Judith A James

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Carl D Langefeld

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Gary S Gilkeson

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Lindsey A Criswell

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Patrick M Gaffney

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Betty P Tsao

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Graciela S Alarcón

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Joan T Merrill

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Rosalind Ramsey-Goldman

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Rosalind Ramsey-Goldman

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Susan A Boackle

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Jeffrey C Edberg

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Amr H Sawalha

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Travis Hughes

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R Hal Scofield

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Adam Adler

2

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Kenneth M Kaufman

4

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Adrienne H Williams

5

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Elizabeth E Brown

7

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Anne M Stevens

14

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Luis M Vilá

19

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Kathy L Moser

24

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Chaim O Jacob

26

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BIOLUPUS Network

31

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Bruce C Richardson

33

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9 August 2017

publication date

1 February 2012

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9 August 2017

published in

Arthritis & Rheumatology

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9 August 2017

volume

64

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9 August 2017

issue

2

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9 August 2017

page(s)

485-492

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Detecting, Characterizing, and Interpreting Nonlinear Gene–Gene Interactions Using Multifactor Dimensionality Reduction

9 August 2017

cites work

1 reference

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Genetically determined Amerindian ancestry correlates with increased frequency of risk alleles for systemic lupus erythematosus

12 July 2018

1 reference

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PD-1 regulates germinal center B cell survival and the formation and affinity of long-lived plasma cells

12 July 2018

1 reference

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Recent advances in the genetics of systemic lupus erythematosus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

Emerging from the shadows: follicular helper T cells in autoimmunity

12 July 2018

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False discovery rate and permutation test: an evaluation in ERP data analysis

12 July 2018

1 reference

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Follicular helper T cells as cognate regulators of B cell immunity

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

Detecting gene-gene interactions that underlie human diseases

12 July 2018

1 reference

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Ancestry informative marker sets for determining continental origin and admixture proportions in common populations in America

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

Polymorphism at the TNF superfamily gene TNFSF4 confers susceptibility to systemic lupus erythematosus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

STAT4 and the risk of rheumatoid arthritis and systemic lupus erythematosus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

PLINK: a tool set for whole-genome association and population-based linkage analyses

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

A genomewide single-nucleotide-polymorphism panel for Mexican American admixture mapping

12 July 2018

1 reference

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Three functional variants of IFN regulatory factor 5 (IRF5) define risk and protective haplotypes for human lupus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

The PTPN22 C1858T functional polymorphism and autoimmune diseases--a meta-analysis

12 July 2018

1 reference

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Examination of ancestry and ethnic affiliation using highly informative diallelic DNA markers: application to diverse and admixed populations and implications for clinical epidemiology and forensic medicine

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

A regulatory polymorphism in PDCD1 is associated with susceptibility to systemic lupus erythematosus in humans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

Case-only design to measure gene-gene interaction

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

Updating the American college of rheumatology revised criteria for the classification of systemic lupus erythematosus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

The 1982 revised criteria for the classification of systemic lupus erythematosus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268866

Evidence for genetic association and interaction between the TYK2 and IRF5 genes in systemic lupus erythematosus

12 July 2018

1 reference

The fourth blade within the beta-propeller is involved specifically in C3bi recognition by integrin alpha M beta 2.

21 January 2018

1 reference

Functional variants in the B-cell gene BANK1 are associated with systemic lupus erythematosus

21 January 2018

1 reference

Evidence for CTLA4 as a susceptibility gene for systemic lupus erythematosus

21 January 2018

1 reference

The mannose-binding lectin gene polymorphisms and systemic lupus erythematosus: two case-control studies and a meta-analysis

21 January 2018

1 reference

A balanced accuracy function for epistasis modeling in imbalanced datasets using multifactor dimensionality reduction.

21 January 2018

1 reference

Both risk alleles for FcγRIIA and FcγRIIIA are susceptibility factors for SLE: a unifying hypothesis

21 January 2018

1 reference

Genetic association of interleukin-21 polymorphisms with systemic lupus erythematosus

21 January 2018

1 reference

A nonsynonymous functional variant in integrin-αM (encoded by ITGAM) is associated with systemic lupus erythematosus

21 January 2018

1 reference

Case-Only Design to Measure Gene-Gene Interaction

21 January 2018

1 reference

-Chain phosphorylation of the human leukocyte CD11b/CD18 (Mac-1) integrin is pivotal for integrin activation to bind ICAMs and leukocyte extravasation

21 January 2018

1 reference

Expansion of circulating T cells resembling follicular helper T cells is a fixed phenotype that identifies a subset of severe systemic lupus erythematosus

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21952918

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Lack of interaction between systemic lupus erythematosus-associated polymorphisms in TYK2 and IRF5

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21952918

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1002/ART.33354

1 reference

9 August 2017

1 reference

9 August 2017

1 reference