JEPEG: a summary statistics based tool for gene-level joint testing of functional variants (Q35367166)

8 August 2017

title

JEPEG: a summary statistics based tool for gene-level joint testing of functional variants (English)

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8 August 2017

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Donghyung Lee

1

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8 August 2017

Vernell S Williamson

2

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8 August 2017

T Bernard Bigdeli

3

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8 August 2017

Brien P Riley

4

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8 August 2017

Ayman H Fanous

5

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8 August 2017

Vladimir I Vladimirov

6

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8 August 2017

Silviu-Alin Bacanu

7

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8 August 2017

language of work or name

English

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publication date

12 December 2014

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8 August 2017

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8 August 2017

volume

31

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8 August 2017

issue

8

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8 August 2017

page(s)

1176-1182

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Creative Commons Attribution 4.0 International

8 August 2017

copyright license

start time

2 October 2016

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April 2023 Public Data File from Crossref

copyright status

copyrighted

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cites work

Biological insights from 108 schizophrenia-associated genetic loci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Fast and accurate imputation of summary statistics enhances evidence of functional enrichment

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Joint analysis of functional genomic data and genome-wide association studies of 18 human traits

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

A genome-wide association study of anorexia nervosa

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Genome-wide association analysis identifies 13 new risk loci for schizophrenia

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

All SNPs are not created equal: genome-wide association studies reveal a consistent pattern of enrichment among functionally annotated SNPs

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Four new loci associations discovered by pathway-based and network analyses of the genome-wide variability profile of Hirschsprung's disease

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

A multi-SNP locus-association method reveals a substantial fraction of the missing heritability

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

An integrated encyclopedia of DNA elements in the human genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

A mega-analysis of genome-wide association studies for major depressive disorder

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Conditional and joint multiple-SNP analysis of GWAS summary statistics identifies additional variants influencing complex traits

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Dissecting the regulatory architecture of gene expression QTLs

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Genome-wide association study identifies a susceptibility locus for schizophrenia in Han Chinese at 11p11.2

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Genome-wide association study identifies five new schizophrenia loci

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Trans-eQTLs reveal that independent genetic variants associated with a complex phenotype converge on intermediate genes, with a major role for the HLA

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Allelic heterogeneity and more detailed analyses of known loci explain additional phenotypic variation and reveal complex patterns of association

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

A map of human genome variation from population-scale sequencing

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

A versatile gene-based test for genome-wide association studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Common SNPs explain a large proportion of the heritability for human height

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Trait-associated SNPs are more likely to be eQTLs: annotation to enhance discovery from GWAS

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Finding the missing heritability of complex diseases

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Common polygenic variation contributes to risk of schizophrenia and bipolar disorder

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Common variants conferring risk of schizophrenia

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

A flexible and accurate genotype imputation method for the next generation of genome-wide association studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Gene expression levels are a target of recent natural selection in the human genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Comparison of association methods for dense marker data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

The UCSC Genome Browser Database: update 2006

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393522

Functional SNPs are enriched for schizophrenia association signals

27 July 2018

1 reference

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTU816

Detecting disease associations due to linkage disequilibrium using haplotype tags: a class of tests and the determinants of statistical power

21 January 2018

1 reference

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTU816

Genetics of gene expression and its effect on disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTU816

Revealing the architecture of gene regulation: the promise of eQTL studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTU816

DIST: direct imputation of summary statistics for unmeasured SNPs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTU816

10.1093/BIOINFORMATICS/BTU816

21 January 2018

Identifiers

DOI

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journals/bioinformatics/LeeWBRFVB15

8 August 2017

DBLP publication ID

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DBLP Dataset 2021-01-02

28 January 2021

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8 August 2017

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