A multi-atlas based method for automated anatomical rat brain MRI segmentation and extraction of PET activity (Q35349838)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25330005 AND SRC:MED&resulttype=core&format=json

21 February 2020

title

A multi-atlas based method for automated anatomical rat brain MRI segmentation and extraction of PET activity (English)

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21 February 2020

7

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21 February 2020

Nicolas Costes

8

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21 February 2020

author name string

Sophie Lancelot

1

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21 February 2020

Roxane Roche

2

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21 February 2020

Afifa Slimen

3

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21 February 2020

Caroline Bouillot

4

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21 February 2020

Elise Levigoureux

5

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21 February 2020

Jean-Baptiste Langlois

6

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21 February 2020

language of work or name

English

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publication date

17 October 2014

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21 February 2020

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21 February 2020

volume

9

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21 February 2020

issue

10

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21 February 2020

page(s)

e109113

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Creative Commons Attribution 4.0 International

21 February 2020

copyright license

start time

17 October 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Waxholm Space atlas of the Sprague Dawley rat brain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

A multi-atlas based method for automated anatomical Macaca fascicularis brain MRI segmentation and PET kinetic extraction

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

A multidimensional magnetic resonance histology atlas of the Wistar rat brain

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Performing label-fusion-based segmentation using multiple automatically generated templates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

A rat brain MRI template with digital stereotaxic atlas of fine anatomical delineations in paxinos space and its automated application in voxel-wise analysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

An in vivo MRI Template Set for Morphometry, Tissue Segmentation, and fMRI Localization in Rats.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Iterative multi-atlas-based multi-image segmentation with tree-based registration

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Automatic method for tracing regions of interest in rat brain magnetic resonance imaging studies

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Small-animal positron emission tomography as a tool for neuropharmacology

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Performance evaluation of an Inveon PET preclinical scanner.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

A fast diffeomorphic image registration algorithm

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

A stereotaxic MRI template set for the rat brain with tissue class distribution maps and co-registered anatomical atlas: application to pharmacological MRI.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Three-dimensional maximum probability atlas of the human brain, with particular reference to the temporal lobe

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Automatic 3D intersubject registration of MR volumetric data in standardized Talairach space

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

A 3D digital map of rat brain

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Deformation-based brain morphometry in rats

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Improving intersubject image registration using tissue-class information benefits robustness and accuracy of multi-atlas based anatomical segmentation

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Multi-atlas based segmentation of brain images: atlas selection and its effect on accuracy

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Construction and evaluation of multitracer small-animal PET probabilistic atlases for voxel-based functional mapping of the rat brain.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Automatic anatomical brain MRI segmentation combining label propagation and decision fusion

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Evaluation of atlas selection strategies for atlas-based image segmentation with application to confocal microscopy images of bee brains

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Development and evaluation of an automated atlas-based image analysis method for microPET studies of the rat brain

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

A template for spatial normalisation of MR images of the rat brain

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Regional spatial normalization: toward an optimal target

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4201469

Measures of the Amount of Ecologic Association Between Species

26 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0109113

Implementation and application of a brain template for multiple volumes of interest

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0109113

10.1371/JOURNAL.PONE.0109113

21 January 2018

Identifiers

DOI

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25330005 AND SRC:MED&resulttype=core&format=json

21 February 2020

0 references

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21 February 2020

PubMed publication ID

25330005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25330005 AND SRC:MED&resulttype=core&format=json