Nonneutral evolution of organelle genes in Silene vulgaris (Q35221611)

7 August 2017

title

Nonneutral evolution of organelle genes in Silene vulgaris (English)

1 reference

7 August 2017

Silene vulgaris

1 reference

1

Gary J Houliston

1 reference

7 August 2017

Matthew S Olson

2

1 reference

7 August 2017

language of work or name

English

0 references

publication date

15 September 2006

1 reference

7 August 2017

number of pages

12

1 reference

inferred from page(s)

published in

Genetics

1 reference

7 August 2017

volume

174

1 reference

7 August 2017

issue

4

1 reference

7 August 2017

page(s)

1983-1994

1 reference

Mathematical Study of the Evolution of Gynodioecy with Cytoplasmic Inheritance under the Effect of a Nuclear Restorer Gene

7 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Multiple major increases and decreases in mitochondrial substitution rates in the plant family Geraniaceae

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Germline bottlenecks, biparental inheritance and selection on mitochondrial variants: a two-level selection model

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Genetics and adaptation in structured populations: sex ratio evolution in Silene vulgaris

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Mitochondrial substitution rates are extraordinarily elevated and variable in a genus of flowering plants

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

The HKA test revisited: a maximum-likelihood-ratio test of the standard neutral model

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Interactions of mitochondrial and nuclear genes that affect male gametophyte development

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

DnaSP, DNA polymorphism analyses by the coalescent and other methods

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Ancient mitochondrial haplotypes and evidence for intragenic recombination in a gynodioecious plant

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Genealogical evidence for epidemics of selfish genes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Punctuated evolution of mitochondrial gene content: high and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

The inheritance of genes in mitochondria and chloroplasts: laws, mechanisms, and models

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

MODELTEST: testing the model of DNA substitution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

The male-sterility polymorphism of Silene vulgaris: analysis of genetic dat from two populations and comparison with Thymus vulgaris.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

The Dynamics of Gynodioecy in Plantago lanceolatu L. II. Mode of Action and Frequencies of Restorer Alleles

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Molecular evolution of angiosperm mitochondrial introns and exons

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Dynamics of plant mitochondrial genome: model of a three-level selection process.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

RNA editing in plant organelles: a fertile field

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Statistical tests of neutrality of mutations

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

A generalized least-squares estimate for the origin of sporophytic self-incompatibility

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Statistical properties of the number of recombination events in the history of a sample of DNA sequences

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

The coalescent process in models with selection and recombination

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Polymorphism at the self-incompatibility locus in Solanaceae predates speciation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

On the number of segregating sites in genetical models without recombination

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Comparison between mitochondrial and chloroplast DNA variation in the native range of Silene vulgaris

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

The hierarchical spatial distribution of chloroplast DNA polymorphism across the introduced range of Silene vulgaris.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Widespread horizontal transfer of mitochondrial genes in flowering plants

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Mitochondrial DNA diversity, population structure, and gender association in the gynodioecious plant Silene vulgaris

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

RDP: detection of recombination amongst aligned sequences

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

Neutrality tests based on the distribution of haplotypes under an infinite-site model.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1698637

The linkage disequilibrium between chloroplast DNA and mitochondrial DNA haplotypes in Beta vulgaris ssp. maritima (L.): the usefulness of both genomes for population genetic studies

26 September 2018

1 reference

12 December 2020

Persistence of selfish genetic elements: population structure and conflict

1 reference

12 December 2020

The effect of subdivision on variation at multi-allelic loci under balancing selection

1 reference

12 December 2020

Linkage disequilibrium and phylogenetic congruence between chloroplast and mitochondrial haplotypes in Silene vulgaris

1 reference

12 December 2020

Population subdivision and the HudsonKreitmanAguade test: testing for deviations from the neutral model in organelle genomes

1 reference

12 December 2020

Plant genetics: gene transfer from parasitic to host plants

1 reference

12 December 2020

Evidence for paternal transmission and heteroplasmy in the mitochondrial genome of Silene vulgaris, a gynodioecious plant

1 reference

12 December 2020

Paternal leakage sustains the cytoplasmic polymorphism underlying gynodioecy but remains invasible by nuclear restorers

1 reference

12 December 2020

Cytoplasmic male sterility in plants: molecular evidence and the nucleocytoplasmic conflict

1 reference

12 December 2020

THE GENETIC STRUCTURE OF A GYNODIOECIOUS PLANT: NUCLEAR AND CYTOPLASMIC GENES

1 reference

12 December 2020

Plant mitochondrial DNA evolves rapidly in structure, but slowly in sequence

1 reference

12 December 2020

10.1534/GENETICS.106.060202

Identifiers

DOI

1 reference

7 August 2017

1 reference

7 August 2017

1 reference