DNA methylation inhibits elongation but not initiation of transcription in Neurospora crassa. (Q35191080)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9308966 AND SRC:MED&resulttype=core&format=json

6 November 2019

title

DNA methylation inhibits elongation but not initiation of transcription in Neurospora crassa (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9308966 AND SRC:MED&resulttype=core&format=json

Glu/Leu/Phe/Val dehydrogenase

6 November 2019

main subject

DNA methylation

0 references

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DNA methyltransferase Dim-2

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1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9308966 AND SRC:MED&resulttype=core&format=json

6 November 2019

author name string

E U Selker

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9308966 AND SRC:MED&resulttype=core&format=json

6 November 2019

publication date

1 September 1997

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9308966 AND SRC:MED&resulttype=core&format=json

6 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9308966 AND SRC:MED&resulttype=core&format=json

6 November 2019

volume

11

1 reference

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6 November 2019

issue

18

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6 November 2019

page(s)

2383-2395

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9308966 AND SRC:MED&resulttype=core&format=json

Epigenetic phenomena in filamentous fungi: useful paradigms or repeat-induced confusion?

6 November 2019

cites work

1 reference

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MeCP2 is a transcriptional repressor with abundant binding sites in genomic chromatin

28 July 2018

1 reference

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Epigenetic control of a transposon-inactivated gene in Neurospora is dependent on DNA methylation

28 July 2018

1 reference

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TFIIH functions in regulating transcriptional elongation by RNA polymerase II in Xenopus oocytes

28 July 2018

1 reference

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Site-specific methylation of the rat prolactin and growth hormone promoters correlates with gene expression

28 July 2018

1 reference

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Mutations affecting the biosynthesis of S-adenosylmethionine cause reduction of DNA methylation in Neurospora crassa

28 July 2018

1 reference

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Methylation induced premeiotically in Ascobolus: coextension with DNA repeat lengths and effect on transcript elongation

28 July 2018

1 reference

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Effects of DNA methylation on DNA-binding proteins and gene expression.

28 July 2018

1 reference

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Role for DNA methylation in genomic imprinting

28 July 2018

1 reference

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Identification of plant genetic loci involved in a posttranscriptional mechanism for meiotically reversible transgene silencing

28 July 2018

1 reference

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DNA methylation and genomic imprinting

28 July 2018

1 reference

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Gene inactivation triggered by recognition between DNA repeats

28 July 2018

1 reference

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Nonsense-mediated mRNA decay in yeast

28 July 2018

1 reference

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Transgenic plant virus resistance mediated by untranslatable sense RNAs: expression, regulation, and fate of nonessential RNAs

28 July 2018

1 reference

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Posttranscriptional silencing of reporter transgenes in tobacco correlates with DNA methylation

28 July 2018

1 reference

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A targeted-replacement system for identification of signals for de novo methylation in Neurospora crassa

28 July 2018

1 reference

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Degradation of mRNA in eukaryotes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Demethylation of the estrogen receptor gene in estrogen receptor-negative breast cancer cells can reactivate estrogen receptor gene expression.

28 July 2018

1 reference

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Inappropriate transcription from the 5' end of the murine dihydrofolate reductase gene masks transcriptional regulation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Expression of a cloned adenovirus gene is inhibited by in vitro methylation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Transcriptional Regulation of Hemoglobin Switching in Chicken Embryos

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Pyrimidine Synthesis in Neurospora crassa: Regulation of Enzyme Activities

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Effect of regional DNA methylation on gene expression

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Cytosine methylation prevents binding to DNA of a HeLa cell transcription factor required for optimal expression of the adenovirus major late promoter

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Effect of in vitro DNA methylation on beta-globin gene expression

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Cloning of the riboB locus of Aspergillus nidulans

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Chromatin structure is required to block transcription of the methylated herpes simplex virus thymidine kinase gene

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Accurate transcription of cloned Neurospora RNA polymerase II-dependent genes in vitro by homologous soluble extracts

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

The cross-pathway control gene of Neurospora crassa, cpc-1, encodes a protein similar to GCN4 of yeast and the DNA-binding domain of the oncogene v-jun-encoded protein

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Rearrangement of duplicated DNA in specialized cells of Neurospora

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Differential DNA methylation during the vegetative life cycle of Neurospora crassa

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Role of an adenovirus E2 promoter binding factor in E1A-mediated coordinate gene control

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

DNA sequence duplications trigger gene inactivation in Neurospora crassa

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Cytosine methylation in CTF and Sp1 recognition sites of an HSV tk promoter: effects on transcription in vivo and on factor binding in vitro

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Repeat-induced G-C to A-T mutations in Neurospora

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Isolation of a transposable element from Neurospora crassa

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Fast light-regulated genes of Neurospora crassa.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

DNA methylation at asymmetric sites is associated with numerous transition mutations

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Arginine-specific repression in Saccharomyces cerevisiae: kinetic data on ARG1 and ARG3 mRNA transcription and stability support a transcriptional control mechanism

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Premeiotic instability of repeated sequences in Neurospora crassa

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Distant upstream regulatory sequences control the level of expression of the am (GDH) locus of Neurospora crassa

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Association of Myn, the murine homolog of Max, with c-Myc stimulates methylation-sensitive DNA binding and ras cotransformation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Sequence and structure of mtr, an amino acid transport gene of Neurospora crassa

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Neurospora crassa clock-controlled genes are regulated at the level of transcription

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

RNA blots: staining procedures and optimization of conditions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

CpG methylation inhibits proenkephalin gene expression and binding of the transcription factor AP-2

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Epimutation of repeated genes in Ascobolus immersus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

5-Azacytidine treatment of HA-A melanoma cells induces Sp1 activity and concomitant transforming growth factor alpha expression

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Suppression of beta-1,3-glucanase transgene expression in homozygous plants

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

The essentials of DNA methylation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Methylation in the preinitiation domain suppresses gene transcription by an indirect mechanism

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Repression of genes by DNA methylation depends on CpG density and promoter strength: evidence for involvement of a methyl-CpG binding protein

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Cytosine methylation associated with repeat-induced point mutation causes epigenetic gene silencing in Neurospora crassa.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Transgene silencing of the al-1 gene in vegetative cells of Neurospora is mediated by a cytoplasmic effector and does not depend on DNA-DNA interactions or DNA methylation

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Negative regulation of FAR1 at the Start of the yeast cell cycle

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Transcriptional regulation in Drosophila during heat shock: a nuclear run-on analysis.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

A poplar tree proteinase inhibitor-like gene promoter is responsive to wounding in transgenic tobacco

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Transcriptional elongation by RNA polymerase II is stimulated by transactivators.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

DNA methylation represses the murine alpha 1(I) collagen promoter by an indirect mechanism

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Role of DNA methylation in the regulation of transcription

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

The nonamer UUAUUUAUU is the key AU-rich sequence motif that mediates mRNA degradation

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Light-induced resetting of a circadian clock is mediated by a rapid increase in frequency transcript

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

DNA methylation associated with repeat-induced point mutation in Neurospora crassa

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

High Stability of Messenger RNA in Growing Cultured Cells

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Molecular cloning and regulatory analysis of the arylsulfatase structural gene of Neurospora crassa

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

Identification and comparison of stable and unstable mRNAs in Saccharomyces cerevisiae

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316521

DNA methylation inhibits transcription indirectly via a methyl-CpG binding protein

27 September 2018

1 reference

12 December 2020

DNA CpG methylation inhibits binding of NF-kappa B proteins to the HIV-1 long terminal repeat cognate DNA motifs

1 reference

12 December 2020

Nitrogen metabolite repression of fluoropyrimidine resistance and pyrimidine uptake in Neurospora crassa

1 reference

12 December 2020

Nucleotide sequence and nuclear protein binding of the two regulatory sequences upstream of the am (GDH) gene in Neurospora

1 reference

12 December 2020

Formaldehyde in formaldehyde/agarose gel may be eliminated without affecting the electrophoretic separation of RNA molecules

1 reference

12 December 2020

Epigenetic mechanisms underlying the imprinting of the mouse H19 gene

1 reference

12 December 2020

Dense nonsymmetrical DNA methylation resulting from repeat-induced point mutation in Neurospora

1 reference

12 December 2020

Abnormal chromosome behavior in Neurospora mutants defective in DNA methylation

1 reference

12 December 2020

Sequential gel mobility shift scanning of 5' upstream sequences of the Neurospora crassa am (GDH) gene

1 reference

12 December 2020

Activation of pausing RNA polymerases by nuclear run-on experiments

1 reference

12 December 2020

Identifiers

DOI

10.1101/GAD.11.18.2383

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9308966 AND SRC:MED&resulttype=core&format=json

6 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9308966 AND SRC:MED&resulttype=core&format=json

6 November 2019

PubMed publication ID

9308966

1 reference