CENP-A nucleosomes localize to transcription factor hotspots and subtelomeric sites in human cancer cells (Q35186792)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25788983 AND SRC:MED&resulttype=core&format=json

3 March 2020

title

CENP-A nucleosomes localize to transcription factor hotspots and subtelomeric sites in human cancer cells (English)

1 reference

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3 March 2020

8

1 reference

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3 March 2020

author name string

Rajbir K Athwal

1

1 reference

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3 March 2020

Marcin P Walkiewicz

2

1 reference

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3 March 2020

Songjoon Baek

3

1 reference

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3 March 2020

Song Fu

4

1 reference

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3 March 2020

Minh Bui

5

1 reference

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3 March 2020

Jordi Camps

6

1 reference

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3 March 2020

Thomas Ried

7

1 reference

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3 March 2020

Yamini Dalal

9

1 reference

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3 March 2020

publication date

13 January 2015

1 reference

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3 March 2020

published in

Epigenetics & Chromatin

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3 March 2020

volume

8

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3 March 2020

page(s)

2

1 reference

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Crystal structure and stable property of the cancer-associated heterotypic nucleosome containing CENP-A and H3.3.

3 March 2020

cites work

1 reference

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The budding yeast Centromere DNA Element II wraps a stable Cse4 hemisome in either orientation in vivo

28 July 2018

2 references

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28 July 2018

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Holocentromeres are dispersed point centromeres localized at transcription factor hotspots

15 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Mislocalization of the centromeric histone variant CenH3/CENP-A in human cells depends on the chaperone DAXX.

28 July 2018

1 reference

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Prognostic value of centromere protein-A expression in patients with epithelial ovarian cancer

28 July 2018

1 reference

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The octamer is the major form of CENP-A nucleosomes at human centromeres

28 July 2018

1 reference

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Identification of early replicating fragile sites that contribute to genome instability

28 July 2018

1 reference

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The CENP-A nucleosome: a battle between Dr Jekyll and Mr Hyde

28 July 2018

1 reference

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Linking abnormal mitosis to the acquisition of DNA damage

28 July 2018

1 reference

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Single-cell genetic analysis of ductal carcinoma in situ and invasive breast cancer reveals enormous tumor heterogeneity yet conserved genomic imbalances and gain of MYC during progression.

28 July 2018

1 reference

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c-Myc is a universal amplifier of expressed genes in lymphocytes and embryonic stem cells

28 July 2018

1 reference

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Chromothripsis and cancer: causes and consequences of chromosome shattering

28 July 2018

1 reference

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Cell-cycle-dependent structural transitions in the human CENP-A nucleosome in vivo

28 July 2018

1 reference

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Centromere protein-A, an essential centromere protein, is a prognostic marker for relapse in estrogen receptor-positive breast cancer

28 July 2018

1 reference

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The 8q24 gene desert: an oasis of non-coding transcriptional activity.

28 July 2018

1 reference

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Causes and consequences of aneuploidy in cancer.

28 July 2018

1 reference

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Tripartite organization of centromeric chromatin in budding yeast

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

The centromeric nucleosome of budding yeast is perfectly positioned and covers the entire centromere

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Crystal structure of the human centromeric nucleosome containing CENP-A

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Heterochromatin boundaries are hotspots for de novo kinetochore formation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Centromeres: unique chromatin structures that drive chromosome segregation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Genomic size of CENP-A domain is proportional to total alpha satellite array size at human centromeres and expands in cancer cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Direct binding of Cenp-C to the Mis12 complex joins the inner and outer kinetochore

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Xenopus HJURP and condensin II are required for CENP-A assembly.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Chromatin accessibility pre-determines glucocorticoid receptor binding patterns.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

An E3 ubiquitin ligase prevents ectopic localization of the centromeric histone H3 variant via the centromere targeting domain

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Psh1 is an E3 ubiquitin ligase that targets the centromeric histone variant Cse4

28 July 2018

1 reference

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Tetrameric organization of vertebrate centromeric nucleosomes

28 July 2018

1 reference

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Telomere disruption results in non-random formation of de novo dicentric chromosomes involving acrocentric human chromosomes

28 July 2018

1 reference

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The expression level of HJURP has an independent prognostic impact and predicts the sensitivity to radiotherapy in breast cancer

28 July 2018

1 reference

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The landscape of somatic copy-number alteration across human cancers

28 July 2018

1 reference

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HJURP binds CENP-A via a highly conserved N-terminal domain and mediates its deposition at centromeres

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

CENPA overexpression promotes genome instability in pRb-depleted human cells

28 July 2018

1 reference

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Double-strand DNA breaks recruit the centromeric histone CENP-A.

28 July 2018

1 reference

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The life and miracles of kinetochores

28 July 2018

1 reference

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HJURP is a cell-cycle-dependent maintenance and deposition factor of CENP-A at centromeres

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Centromere-specific assembly of CENP-a nucleosomes is mediated by HJURP.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

The use of genetic markers to identify lung cancer in fine needle aspiration samples.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Translocations involving 8q24 in Burkitt lymphoma and other malignant lymphomas: a historical review of cytogenetics in the light of todays knowledge

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Convergence of mutation and epigenetic alterations identifies common genes in cancer that predict for poor prognosis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Interaction of the glucocorticoid receptor with the chromatin landscape

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Tetrameric structure of centromeric nucleosomes in interphase Drosophila cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Chromatin dynamics and the preservation of genetic information

28 July 2018

1 reference

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Propagation of centromeric chromatin requires exit from mitosis.

28 July 2018

1 reference

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H2A.Z contributes to the unique 3D structure of the centromere

28 July 2018

1 reference

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Proteolysis restricts localization of CID, the centromere-specific histone H3 variant of Drosophila, to centromeres.

28 July 2018

1 reference

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Chaperone-mediated assembly of centromeric chromatin in vitro

28 July 2018

1 reference

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Human centromeric chromatin is a dynamic chromosomal domain that can spread over noncentromeric DNA

28 July 2018

1 reference

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Mislocalization of the Drosophila centromere-specific histone CID promotes formation of functional ectopic kinetochores

28 July 2018

1 reference

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Long-range oscillation in a periodic DNA sequence motif may influence nucleosome array formation

28 July 2018

1 reference

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Overexpression and mistargeting of centromere protein-A in human primary colorectal cancer

28 July 2018

1 reference

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Chromosome-mediated alterations of the MYC gene in human cancer.

28 July 2018

1 reference

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Conserved organization of centromeric chromatin in flies and humans

28 July 2018

1 reference

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Specification of kinetochore-forming chromatin by the histone H3 variant CENP-A

28 July 2018

1 reference

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Chromatin assembly at kinetochores is uncoupled from DNA replication

28 July 2018

1 reference

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Human centromere protein A (CENP-A) can replace histone H3 in nucleosome reconstitution in vitro

28 July 2018

1 reference

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Expression and purification of recombinant histones and nucleosome reconstitution

28 July 2018

1 reference

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The language of covalent histone modifications

28 July 2018

1 reference

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Crystal structure of the nucleosome core particle at 2.8 Å resolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

A 17-kD centromere protein (CENP-A) copurifies with nucleosome core particles and with histones

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Three human chromosomal autoantigens are recognized by sera from patients with anti-centromere antibodies

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

A human centromere antigen (CENP-B) interacts with a short specific sequence in alphoid DNA, a human centromeric satellite

28 July 2018

1 reference

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The chromatin structure of specific genes: I. Evidence for higher order domains of defined DNA sequence

28 July 2018

1 reference

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Genome-scale mapping of DNase I hypersensitivity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

The deubiquitinase USP44 is a tumor suppressor that protects against chromosome missegregation.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Expression and prognostic significance of centromere protein A in human lung adenocarcinoma.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

In vitro centromere and kinetochore assembly on defined chromatin templates.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Chromosomes and cancer cells.

27 September 2018

1 reference

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Centromere protein A dynamics in human pluripotent stem cell self-renewal, differentiation and DNA damage.

27 September 2018

1 reference

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Integrative genomics reveals mechanisms of copy number alterations responsible for transcriptional deregulation in colorectal cancer

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Nucleosome stability mediated by histone variants H3.3 and H2A.Z.

27 September 2018

1 reference

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Elevated rates of sister chromatid exchange at chromosome ends

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

DNase-chip: a high-resolution method to identify DNase I hypersensitive sites using tiled microarrays

27 September 2018

1 reference

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Centromere protein H is up-regulated in primary human colorectal cancer and its overexpression induces aneuploidy

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Methods and statistics for combining motif match scores

27 September 2018

1 reference

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Assembly of CENP-A into centromeric chromatin requires a cooperative array of nucleosomal DNA contact sites

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363203

Propagation of globin DNAase i-hypersensitive sites in absence of factors required for induction: A possible mechanism for determination

27 September 2018

1 reference

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CENP-A octamers do not confer a reduction in nucleosome height by AFM

27 September 2018

1 reference

12 December 2020

The DNA region around the c-myc gene and its amplification in human tumour cell lines

1 reference

12 December 2020

Comparison between the CENP-A and histone H3 structures in nucleosomes

1 reference

12 December 2020

Methods for in situ localization of proteins and DNA in the centromere-kinetochore complex

1 reference

12 December 2020

Atomic force microscopy of DNA and protein-DNA complexes using functionalized mica substrates

1 reference

12 December 2020

Identifiers

DOI

10.1186/1756-8935-8-2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25788983 AND SRC:MED&resulttype=core&format=json

Dimensions Publication ID

3 March 2020

1006956775

0 references

Fatcat ID

release_ejjwolkizvfyfgzaekyfzkoraq

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ejjwolkizvfyfgzaekyfzkoraq

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25788983 AND SRC:MED&resulttype=core&format=json

3 March 2020

PubMed publication ID

25788983

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25788983 AND SRC:MED&resulttype=core&format=json