Efficiency of single-nucleotide polymorphism haplotype estimation from pooled DNA. (Q35163387)

6 August 2017

title

Efficiency of single-nucleotide polymorphism haplotype estimation from pooled DNA. (English)

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single-nucleotide polymorphism

6 August 2017

main subject

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6

Mark Lathrop

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6 August 2017

4

Fumihiko Matsuda

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6 August 2017

Yaning Yang

1

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6 August 2017

Jingshan Zhang

2

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6 August 2017

Josephine Hoh

3

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6 August 2017

Peng Xu

5

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6 August 2017

Jurg Ott

7

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6 August 2017

language of work or name

English

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publication date

30 May 2003

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Proceedings of the National Academy of Sciences of the United States of America

6 August 2017

published in

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6 August 2017

volume

100

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6 August 2017

issue

12

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6 August 2017

page(s)

7225-7230

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Estimation of haplotype frequencies, linkage-disequilibrium measures, and combination of haplotype copies in each pool by use of pooled DNA data

6 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=165857

Identification of the sources of error in allele frequency estimations from pooled DNA indicates an optimal experimental design

13 July 2018

1 reference

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High-throughput screening for evidence of association by using mass spectrometry genotyping on DNA pools

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=165857

DNA Pooling: a tool for large-scale association studies

13 July 2018

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Angiotensinogen gene polymorphism at -217 affects basal promoter activity and is associated with hypertension in African-Americans

13 July 2018

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Precise estimation of allele frequencies of single-nucleotide polymorphisms by a quantitative SSCP analysis of pooled DNA.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=165857

Accuracy of haplotype frequency estimation for biallelic loci, via the expectation-maximization algorithm for unphased diploid genotype data

13 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=165857

A simple method for analyzing microsatellite allele image patterns generated from DNA pools and its application to allelic association studies

13 July 2018

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Pooled-sampling makes high-resolution mapping practical with DNA markers

13 July 2018

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An E-M algorithm and testing strategy for multiple-locus haplotypes

13 July 2018

1 reference

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HAPLO: a program using the EM algorithm to estimate the frequencies of multi-site haplotypes.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=165857

Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population

13 July 2018

1 reference

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Inference of haplotypes from PCR-amplified samples of diploid populations

13 July 2018

1 reference

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DNA pooling in mutation detection with reference to sequence analysis

13 July 2018

1 reference

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On the use of DNA pooling to estimate haplotype frequencies

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.1237858100

Efficiency of DNA pooling to estimate joint allele frequencies and measure linkage disequilibrium

21 January 2018

1 reference

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Population stratification in epidemiologic studies of common genetic variants and cancer: quantification of bias

21 January 2018

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Allele Frequency Distributions in Pooled DNA Samples: Applications to Mapping Complex Disease Genes

21 January 2018

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PubMed

https://pubmed.ncbi.nlm.nih.gov/12777616

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1237858100

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6 August 2017

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6 August 2017

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