Bridged filaments of histone-like nucleoid structuring protein pause RNA polymerase and aid termination in bacteria (Q35111368)

6 August 2017

title

Bridged filaments of histone-like nucleoid structuring protein pause RNA polymerase and aid termination in bacteria (English)

1 reference

6 August 2017

Matthew V Kotlajich

1

1 reference

6 August 2017

Daniel R Hron

2

1 reference

6 August 2017

Beth A Boudreau

3

1 reference

6 August 2017

Zhiqiang Sun

4

1 reference

6 August 2017

Yuri L Lyubchenko

5

1 reference

6 August 2017

Robert Landick

6

1 reference

6 August 2017

language of work or name

English

0 references

publication date

16 January 2015

1 reference

6 August 2017

1 reference

6 August 2017

volume

4

1 reference

describes a project that uses

6 August 2017

ImageQuant

object named as

ImageQuant

2 references

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4337669/fullTextXML

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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9 July 2018

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The β Subunit Gate Loop Is Required for RNA Polymerase Modification by RfaH and NusG

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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Escherichia coli histone-like protein H-NS preferentially binds to horizontally acquired DNA in association with RNA polymerase

9 July 2018

1 reference

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Nucleosome displacement in transcription

9 July 2018

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H-NS is a part of a thermally controlled mechanism for bacterial gene regulation.

9 July 2018

1 reference

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Evidence for distinct mechanisms facilitating transcript elongation through chromatin in vivo

9 July 2018

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Transcript cleavage factors GreA and GreB act as transient catalytic components of RNA polymerase

9 July 2018

1 reference

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Increased bending rigidity of single DNA molecules by H-NS, a temperature and osmolarity sensor

9 July 2018

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Temperature- and H-NS-dependent regulation of a plasmid-encoded virulence operon expressing Escherichia coli hemolysin

9 July 2018

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Structural basis for H-NS-mediated trapping of RNA polymerase in the open initiation complex at the rrnB P1.

9 July 2018

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H-NS mediated compaction of DNA visualised by atomic force microscopy

9 July 2018

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9 July 2018

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9 July 2018

1 reference

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Identification of the DNA binding surface of H-NS protein from Escherichia coli by heteronuclear NMR spectroscopy

9 July 2018

1 reference

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The ins and outs of virulence gene expression: Mg2 as a regulatory signal

9 July 2018

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9 July 2018

1 reference

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Scanning force microscopy of DNA deposited onto mica: equilibration versus kinetic trapping studied by statistical polymer chain analysis.

9 July 2018

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Interactions of the nucleoid-associated DNA-binding protein H-NS with the regulatory region of the osmotically controlled proU operon of Escherichia coli.

9 July 2018

1 reference

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GreA-induced transcript cleavage in transcription complexes containing Escherichia coli RNA polymerase is controlled by multiple factors, including nascent transcript location and structure.

9 July 2018

1 reference

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NusG is required to overcome a kinetic limitation to Rho function at an intragenic terminator

9 July 2018

1 reference

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Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones

9 July 2018

1 reference

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lac Repressor blocks transcribing RNA polymerase and terminates transcription

9 July 2018

1 reference

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Supercoiling of the DNA template during transcription

9 July 2018

1 reference

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Identification of a cold shock transcriptional enhancer of the Escherichia coli gene encoding nucleoid protein H-NS.

9 July 2018

1 reference

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Termination efficiency at rho-dependent terminators depends on kinetic coupling between RNA polymerase and rho

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337669

Elongation by Escherichia coli RNA polymerase is blocked in vitro by a site-specific DNA binding protein

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337669

Requirement for E. coli NusG protein in factor-dependent transcription termination

9 July 2018

1 reference

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Pervasive transcription: illuminating the dark matter of bacterial transcriptomes

9 July 2018

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Interaction surface of the transcription terminator Rho required to form a complex with the C-terminal domain of the antiterminator NusG.

27 September 2018

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Investigation of the self-association and hetero-association interactions of H-NS and StpA from Enterobacteria

27 September 2018

1 reference

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A systematic in vitro study of nucleoprotein complexes formed by bacterial nucleoid-associated proteins revealing novel types of DNA organization

27 September 2018

1 reference

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Transcription termination factor rho prefers catalytically active elongation complexes for releasing RNA.

27 September 2018

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H-NS promotes looped domain formation in the bacterial chromosome

27 September 2018

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H-NS, the genome sentinel

27 September 2018

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The H-NS protein represses transcription of the eltAB operon, which encodes heat-labile enterotoxin in enterotoxigenic Escherichia coli, by binding to regions downstream of the promoter.

27 September 2018

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Thermo-osmoregulation of heat-labile enterotoxin expression by Escherichia coli

27 September 2018

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The histone-like nucleoid structuring protein H-NS represses the Escherichia coli bgl operon downstream of the promoter

27 September 2018

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The transcriptional regulator RfaH stimulates RNA chain synthesis after recruitment to elongation complexes by the exposed nontemplate DNA strand.

27 September 2018

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The RNA-DNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase.

27 September 2018

1 reference

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Transcript cleavage factors from E. coli.

27 September 2018

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Overexpression and purification of the sigma subunit of Escherichia coli RNA polymerase

27 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.7554/ELIFE.04970

Post-transcriptional enhancement of Escherichia coli bgl operon silencing by limitation of BglG-mediated antitermination at low transcription rates

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.7554/ELIFE.04970

Transcriptional silencing and thermoregulation of gene expression in Escherichia coli

21 January 2018

2 references

Crossref

https://api.crossref.org/works/10.7554/ELIFE.04970

21 January 2018

12 December 2020

H-NS cooperative binding to high-affinity sites in a regulatory element results in transcriptional silencing

1 reference

12 December 2020

High magnesium content of Escherichia coli B

1 reference

12 December 2020

The presence of nucleosomes on a DNA template prevents initiation by RNA polymerase II in vitro

1 reference

12 December 2020

Elongation factor NusG interacts with termination factor rho to regulate termination and antitermination of transcription

1 reference

12 December 2020

Overcoming a nucleosomal barrier to transcription

1 reference

12 December 2020

Mechanism of Transcription Through the Nucleosome by Eukaryotic RNA Polymerase

1 reference

12 December 2020

Nature of the nucleosomal barrier to RNA polymerase II

1 reference

12 December 2020

Characterization of the cytoplasm of Escherichia coli K-12 as a function of external osmolarity. Implications for protein-DNA interactions in vivo

1 reference

12 December 2020

Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity

1 reference

12 December 2020

Expression of the hemolysin operon in Escherichia coli is modulated by a nucleoid-protein complex that includes the proteins Hha and H-NS

1 reference

12 December 2020

Regulation of rho-dependent transcription termination by NusG is specific to the Escherichia coli elongation complex

1 reference

12 December 2020

Interaction of the nucleoid-associated proteins Hha and H-NS to modulate expression of the hemolysin operon in Escherichia coli

1 reference

12 December 2020

Identifiers

DOI

10.7554/ELIFE.04970

1 reference

6 August 2017

1 reference

6 August 2017

1 reference