Multiple lineages of ancient CR1 retroposons shaped the early genome evolution of amniotes (Q35047493)

6 August 2017

title

Multiple lineages of ancient CR1 retroposons shaped the early genome evolution of amniotes (English)

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6 August 2017

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13

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Jürgen Brosius

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Arian F Smit

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Federico G Hoffmann

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author name string

Gennady Churakov

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Meganathan P Ramakodi

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Roy N Platt

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Jerzy Jurka

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Kenji K Kojima

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Juan Caballero

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Kent A Vliet

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Richard E Green

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David A Ray

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Jürgen Schmitz

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6 August 2017

publication date

11 December 2014

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Genome Biology and Evolution

6 August 2017

published in

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6 August 2017

volume

7

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6 August 2017

issue

1

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6 August 2017

page(s)

205-217

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Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs

6 August 2017

cites work

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8 July 2018

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8 July 2018

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Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes

8 July 2018

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A time-calibrated species tree of Crocodylia reveals a recent radiation of the true crocodiles

8 July 2018

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The transposable element profile of the anolis genome: How a lizard can provide insights into the evolution of vertebrate genome size and structure

8 July 2018

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8 July 2018

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Mesozoic retroposons reveal parrots as the closest living relatives of passerine birds

8 July 2018

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Complete mitochondrial genome sequences of three Crocodylus species and their comparison within the Order Crocodylia

8 July 2018

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A novel web-based TinT application and the chronology of the Primate Alu retroposon activity

8 July 2018

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Paleogenomic data suggest mammal-like genome size in the ancestral amniote and derived large genome size in amphibians.

8 July 2018

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8 July 2018

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PiggyBac-ing on a primate genome: novel elements, recent activity and horizontal transfer

8 July 2018

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Genome evolution in Reptilia, the sister group of mammals

8 July 2018

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8 July 2018

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Calibration of mutation rates reveals diverse subfamily structure of galliform CR1 repeats

8 July 2018

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8 July 2018

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Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of mammals

8 July 2018

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8 July 2018

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8 July 2018

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Genome analysis of the platypus reveals unique signatures of evolution

8 July 2018

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8 July 2018

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Biased distributions and decay of long interspersed nuclear elements in the chicken genome

8 July 2018

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Waves of genomic hitchhikers shed light on the evolution of gamebirds (Aves: Galliformes)

8 July 2018

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Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

8 July 2018

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Phylogenomic investigation of CR1 LINE diversity in reptiles

8 July 2018

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Origin of avian genome size and structure in non-avian dinosaurs

8 July 2018

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Phylogenomics of nonavian reptiles and the structure of the ancestral amniote genome

8 July 2018

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SINEs of speciation: tracking lineages with retroposons

8 July 2018

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Mitogenomic analyses place the gharial (Gavialis gangeticus) on the crocodile tree and provide pre-K/T divergence times for most crocodilians

8 July 2018

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8 July 2018

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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

8 July 2018

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The repetitive landscape of the chicken genome

8 July 2018

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8 July 2018

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Combined support for wholesale taxic atavism in gavialine crocodylians

8 July 2018

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True and false gharials: a nuclear gene phylogeny of crocodylia

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Determination of the entire sequence of turtle CR1: the first open reading frame of the turtle CR1 element encodes a protein with a novel zinc finger motif

8 July 2018

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Chicken repeat 1 (CR1) elements, which define an ancient family of vertebrate non-LTR retrotransposons, contain two closely spaced open reading frames

8 July 2018

1 reference

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Chicken repeat 1 elements contain a pol-like open reading frame and belong to the non-long terminal repeat class of retrotransposons

8 July 2018

1 reference

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Evolution of chicken repeat 1 (CR1) elements: evidence for ancient subfamilies and multiple progenitors

8 July 2018

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Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: A mechanism for non-LTR retrotransposition

8 July 2018

1 reference

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A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

8 July 2018

1 reference

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A chicken middle-repetitive DNA sequence which shares homology with mammalian ubiquitous repeats

8 July 2018

1 reference

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Genomic structure and possible retroviral origin of the chicken CR1 repetitive DNA sequence family

8 July 2018

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8 July 2018

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A complete skull ofAllodaposuchus precedensNopcsa, 1928 (Eusuchia) and a reassessment of the morphology of the taxon based on the Romanian remains

8 July 2018

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Subfamilies of CR1 non-LTR retrotransposons have different 5'UTR sequences but are otherwise conserved

21 January 2018

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Are transposable element insertions homoplasy free?: an examination using the avian tree of life

21 January 2018

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Insertion events of CR1 retrotransposable elements elucidate the phylogenetic branching order in galliform birds

21 January 2018

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The esterase and PHD domains in CR1-like non-LTR retrotransposons

21 January 2018

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Evolutionary dynamics in a novel L2 clade of non-LTR retrotransposons in Deuterostomia

21 January 2018

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The evolutionary dynamics of autonomous non-LTR retrotransposons in the lizard Anolis carolinensis shows more similarity to fish than mammals

21 January 2018

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SINEs of a nearly perfect character.

21 January 2018

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Cretaceous Crocodyliforms from the Sahara

21 January 2018

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Retroposon insertions and the chronology of avian sex chromosome evolution

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25503085

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Phylogenomic analysis of the L1 retrotransposons in Deuterostomia

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25503085

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/GBE/EVU256

1 reference

6 August 2017

1 reference

6 August 2017

1 reference