Divergent transcriptional regulatory logic at the intersection of tissue growth and developmental patterning. (Q34988041)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039600 AND SRC:MED&resulttype=core&format=json

21 February 2020

title

Divergent transcriptional regulatory logic at the intersection of tissue growth and developmental patterning (English)

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21 February 2020

2

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21 February 2020

Nicolas Nègre

4

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21 February 2020

author name string

Matthew Slattery

1

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21 February 2020

Lijia Ma

3

1 reference

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21 February 2020

Kevin P White

5

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21 February 2020

Richard S Mann

6

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21 February 2020

publication date

5 September 2013

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21 February 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039600 AND SRC:MED&resulttype=core&format=json

21 February 2020

volume

9

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21 February 2020

issue

9

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21 February 2020

page(s)

e1003753

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Creative Commons Attribution 4.0 International

21 February 2020

copyright license

start time

5 September 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Developmental Regulation of Chromatin Conformation by Hox Proteins in Drosophila

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8 July 2018

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Genome-wide protein-DNA binding dynamics suggest a molecular clutch for transcription factor function

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Yki/YAP, Sd/TEAD and Hth/MEIS Control Tissue Specification in the Drosophila Eye Disc Epithelium

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Hippo signaling: growth control and beyond

8 July 2018

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The Hippo Signaling Pathway in Development and Cancer

8 July 2018

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Systematic protein location mapping reveals five principal chromatin types in Drosophila cells

8 July 2018

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Chromatin Landscape Dictates HSF Binding to Target DNA Elements

8 July 2018

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Modeling bistable cell-fate choices in the Drosophila eye: qualitative and quantitative perspectives

8 July 2018

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Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

8 July 2018

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Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming.

8 July 2018

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Characterization of an antagonistic switch between histone H3 lysine 27 methylation and acetylation in the transcriptional regulation of Polycomb group target genes

8 July 2018

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Dynamic PER repression mechanisms in the Drosophila circadian clock: from on-DNA to off-DNA.

8 July 2018

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A comprehensive map of insulator elements for the Drosophila genome

8 July 2018

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Transcription factor choice in the Hippo signaling pathway: homothorax and yorkie regulation of the microRNA bantam in the progenitor domain of the Drosophila eye imaginal disc

8 July 2018

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Mechanisms of polycomb gene silencing: knowns and unknowns

8 July 2018

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Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions

8 July 2018

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Genome-wide views of chromatin structure

8 July 2018

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YAP, TAZ, and Yorkie: a conserved family of signal-responsive transcriptional coregulators in animal development and human disease

8 July 2018

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YAP: at the crossroad between transformation and tumor suppression

8 July 2018

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Shadow enhancers as a source of evolutionary novelty

8 July 2018

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Tools for neuroanatomy and neurogenetics in Drosophila

8 July 2018

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Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites

8 July 2018

1 reference

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SCALLOPED interacts with YORKIE, the nuclear effector of the hippo tumor-suppressor pathway in Drosophila

8 July 2018

1 reference

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Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm

8 July 2018

1 reference

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The TEAD/TEF family of transcription factor Scalloped mediates Hippo signaling in organ size control

8 July 2018

1 reference

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Molecular integration of wingless, decapentaplegic, and autoregulatory inputs into Distalless during Drosophila leg development.

8 July 2018

1 reference

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Temporal ChIP-on-chip reveals Biniou as a universal regulator of the visceral muscle transcriptional network

8 July 2018

1 reference

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Elucidation of a universal size-control mechanism in Drosophila and mammals

8 July 2018

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Genome-wide mapping of in vivo protein-DNA interactions

8 July 2018

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An optimized transgenesis system for Drosophila using germ-line-specific phiC31 integrases

8 July 2018

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A balance between two nuclear localization sequences and a nuclear export sequence governs extradenticle subcellular localization

8 July 2018

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The carnegie protein trap library: a versatile tool for Drosophila developmental studies

8 July 2018

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FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin

8 July 2018

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Insights into transcription enhancer factor 1 (TEF-1) activity from the solution structure of the TEA domain

8 July 2018

1 reference

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The bantam microRNA is a target of the hippo tumor-suppressor pathway

8 July 2018

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The Hippo pathway regulates the bantam microRNA to control cell proliferation and apoptosis in Drosophila

8 July 2018

1 reference

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Model-based analysis of tiling-arrays for ChIP-chip.

8 July 2018

1 reference

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Hotspots of transcription factor colocalization in the genome of Drosophila melanogaster

8 July 2018

1 reference

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The Hippo signaling pathway coordinately regulates cell proliferation and apoptosis by inactivating Yorkie, the Drosophila Homolog of YAP

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Ultraconserved elements in insect genomes: a highly conserved intronic sequence implicated in the control of homothorax mRNA splicing

8 July 2018

1 reference

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Construction of transgenic Drosophila by using the site-specific integrase from phage phiC31

8 July 2018

1 reference

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Signal integration during development: insights from the Drosophila eye.

8 July 2018

1 reference

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JASPAR: an open-access database for eukaryotic transcription factor binding profiles

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

The Drosophila Mst ortholog, hippo, restricts growth and cell proliferation and promotes apoptosis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

hippo encodes a Ste-20 family protein kinase that restricts cell proliferation and promotes apoptosis in conjunction with salvador and warts

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Combinatorial control of Drosophila eye development by eyeless, homothorax, and teashirt

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

The bantam gene regulates Drosophila growth

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Three habits of highly effective signaling pathways: principles of transcriptional control by developmental cell signaling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

R8 development in the Drosophila eye: a paradigm for neural selection and differentiation.

8 July 2018

1 reference

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Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Genome-wide location and function of DNA binding proteins

8 July 2018

1 reference

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Identification of in vivo DNA targets of chromatin proteins using tethered dam methyltransferase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

The control of trunk Hox specificity and activity by Extradenticle

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Control of the nuclear localization of Extradenticle by competing nuclear import and export signals

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

The Vestigial and Scalloped proteins act together to directly regulate wing-specific gene expression in Drosophila

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Control of antennal versus leg development in Drosophila

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Meis Proteins are Major In Vivo DNA Binding Partners for Wild-Type but Not Chimeric Pbx Proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Combinatorial control required for the specificity of yeast MAPK signaling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Genetic control of programmed cell death in Drosophila

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

The sequence 5'-AAUAAA-3'forms parts of the recognition site for polyadenylation of late SV40 mRNAs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Individual stripe regulatory elements in the Drosophila hairy promoter respond to maternal, gap, and pair-rule genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Dynamic CRM occupancy reflects a temporal map of developmental progression

8 July 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1003753

High conservation of transcription factor binding and evidence for combinatorial regulation across six Drosophila species

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1003753

SnapShot: The hippo signaling pathway.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1003753

The Crumbs complex couples cell density sensing to Hippo-dependent control of the TGF-β-SMAD pathway.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1003753

The TEAD/TEF family protein Scalloped mediates transcriptional output of the Hippo growth-regulatory pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1003753

Further developmental roles of the Vestigial/Scalloped transcription complex during wing development in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1003753

Patterning function of homothorax/extradenticle in the thorax of Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1003753

homothorax and iroquois-C genes are required for the establishment of territories within the developing eye disc

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1003753

Odd paired transcriptional activation of decapentaplegic in the Drosophila eye/antennal disc is cell autonomous but indirect.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1003753

Nuclear translocation of extradenticle requires homothorax, which encodes an extradenticle-related homeodomain protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1003753

Distinct functions of homeodomain-containing and homeodomain-less isoforms encoded by homothorax.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1003753

Binding of the Vestigial co-factor switches the DNA-target selectivity of the Scalloped selector protein.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Function and regulation of homothorax in the wing imaginal disc of Drosophila

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

A dual role for homothorax in inhibiting wing blade development and specifying proximal wing identities in Drosophila.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

Regulation of Hox target genes by a DNA bound Homothorax/Hox/Extradenticle complex.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764184

10.1371/JOURNAL.PGEN.1003753

26 October 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039600 AND SRC:MED&resulttype=core&format=json

21 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039600 AND SRC:MED&resulttype=core&format=json

21 February 2020

PubMed publication ID

24039600

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039600 AND SRC:MED&resulttype=core&format=json