Systematic analysis and comparison of nucleotide-binding site disease resistance genes in a diploid cotton Gossypium raimondii (Q34924102)

5 August 2017

title

Systematic analysis and comparison of nucleotide-binding site disease resistance genes in a diploid cotton Gossypium raimondii (English)

1 reference

5 August 2017

Gossypium raimondii

1 reference

Hengling Wei

1

1 reference

5 August 2017

Wei Li

2

1 reference

5 August 2017

Xiwei Sun

3

1 reference

5 August 2017

Shuijin Zhu

4

1 reference

5 August 2017

Jun Zhu

5

1 reference

5 August 2017

publication date

6 August 2013

1 reference

5 August 2017

1 reference

5 August 2017

volume

8

1 reference

5 August 2017

issue

8

1 reference

5 August 2017

page(s)

e68435

1 reference

Creative Commons Attribution 4.0 International

5 August 2017

copyright license

start time

6 August 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

The draft genome of a diploid cotton Gossypium raimondii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Genome-wide mapping of NBS-LRR genes and their association with disease resistance in soybean

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

A primary survey on bryophyte species reveals two novel classes of nucleotide-binding site (NBS) genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

QTL analysis for transgressive resistance to root-knot nematode in interspecific cotton (Gossypium spp.) progeny derived from susceptible parents

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Genome-wide identification and mapping of NBS-encoding resistance genes in Solanum tuberosum group phureja

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Deconstruction of the (paleo)polyploid grapevine genome based on the analysis of transposition events involving NBS resistance genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

The Pfam protein families database

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Survey and characterization of NBS-LRR (R) genes in Curcuma longa transcriptome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

A genomic analysis of disease-resistance genes encoding nucleotide binding sites in Sorghum bicolor

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

A genome-wide genetic map of NB-LRR disease resistance loci in potato

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

PRGdb: a bioinformatics platform for plant resistance gene analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Genome-wide identification of NBS-encoding resistance genes in Brassica rapa

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Genome-wide analysis of Carica papaya reveals a small NBS resistance gene family

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

InterPro: the integrative protein signature database

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Genome-wide identification of NBS resistance genes in Populus trichocarpa

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Identification and characterization of nucleotide-binding site-leucine-rich repeat genes in the model plant Medicago truncatula

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Structure and function of resistance proteins in solanaceous plants.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Plant NBS-LRR proteins in pathogen sensing and host defense

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Plant NBS-LRR proteins: adaptable guards

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Analysis of the melon genome in regions encompassing TIR-NBS-LRR resistance genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

The Genomes of Oryza sativa: a history of duplications

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Plant disease resistance protein signaling: NBS-LRR proteins and their partners

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Tandem and segmental gene duplication and recombination in the evolution of plant disease resistance gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Understanding the functions of plant disease resistance proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

An expressed pseudogene regulates the messenger-RNA stability of its homologous coding gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

The arms race is ancient history in Arabidopsis, the wildflower

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide-binding superfamily

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

SMART, a simple modular architecture research tool: identification of signaling domains

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Sequence mapping by electronic PCR

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Reductase activity encoded by the HM1 disease resistance gene in maize

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Tracing the origin and evolutionary history of plant nucleotide-binding site-leucine-rich repeat (NBS-LRR) genes

8 July 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Systematic analysis and comparison of nucleotide-binding site disease resistance genes in maize.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Phylogenetic and evolutionary analysis of NBS-encoding genes in Rutaceae fruit crops

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Genome-wide identification of NBS genes in japonica rice reveals significant expansion of divergent non-TIR NBS-LRR genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Regions outside of the leucine-rich repeats of flax rust resistance proteins play a role in specificity determination.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Diversification of non-TIR class NB-LRR genes in relation to whole-genome duplication events in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Toward sequencing cotton (Gossypium) genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

An HMM model for coiled-coil domains and a comparison with PSSM-based predictions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Extent of gene duplication in the genomes of Drosophila, nematode, and yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Molecular mapping of Verticillium wilt resistance QTL clustered on chromosomes D7 and D9 in upland cotton

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Specific targeting of the Arabidopsis resistance protein RPW8.2 to the interfacial membrane encasing the fungal Haustorium renders broad-spectrum resistance to powdery mildew

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

TIR-X and TIR-NBS proteins: two new families related to disease resistance TIR-NBS-LRR proteins encoded in Arabidopsis and other plant genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Mapping Fusarium wilt race 1 resistance genes in cotton by inheritance, QTL and sequencing composition

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Barley disease resistance gene analogs of the NBS-LRR class: identification and mapping

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3735570

Unique evolutionary pattern of numbers of gramineous NBS–LRR genes

26 October 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0068435

Genome-wide investigation on the genetic variations of rice disease resistance genes

21 January 2018

1 reference

12 December 2020

Strong positive selection drives rapid diversification of R-genes in Arabidopsis relatives

1 reference

12 December 2020

Resistance gene analogues identified through the NBS-profiling method map close to major genes and QTL for disease resistance in apple

1 reference

12 December 2020

Relative evolutionary rates of NBS-encoding genes revealed by soybean segmental duplication

1 reference

12 December 2020

The Arabidopsis RPW8 resistance protein is recruited to the extrahaustorial membrane of biotrophic powdery mildew fungi

1 reference

12 December 2020

Recent duplications dominate NBS-encoding gene expansion in two woody species

1 reference

12 December 2020

Mapping and quantitative trait loci analysis of verticillium wilt resistance genes in cotton

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0068435

Identifiers

DOI

1 reference

5 August 2017

0 references

1 reference

5 August 2017

1 reference