Assembly of viral genomes from metagenomes (Q34730126)

4 August 2017

title

Assembly of viral genomes from metagenomes (English)

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4 August 2017

Anita C Schürch

7

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Ab Osterhaus

series ordinal

6

object named as

Albert D M E Osterhaus

1 reference

4 August 2017

5

Marion P Koopmans

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4 August 2017

Rogier Bodewes

2

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Saskia L Smits

series ordinal

1

object named as

Saskia L Smits

1 reference

4 August 2017

Aritz Ruiz-Gonzalez

3

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4 August 2017

Wolfgang Baumgärtner

series ordinal

4

1 reference

4 August 2017

publication date

18 December 2014

1 reference

Frontiers in Microbiology

4 August 2017

published in

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4 August 2017

volume

5

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4 August 2017

page(s)

714

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Metagenomic survey for viruses in Western Arctic caribou, Alaska, through iterative assembly of taxonomic units

4 August 2017

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Viral metagenomic analysis of feces of wild small carnivores

7 July 2018

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7 July 2018

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Tackling soil diversity with the assembly of large, complex metagenomes

7 July 2018

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The complete genome sequence for putative H₂- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome

7 July 2018

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Empirical validation of viral quasispecies assembly algorithms: state-of-the-art and challenges

7 July 2018

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The origin of biased sequence depth in sequence-independent nucleic acid amplification and optimization for efficient massive parallel sequencing

7 July 2018

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A new method for extracting skin microbes allows metagenomic analysis of whole-deep skin

7 July 2018

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Evaluation of rapid and simple techniques for the enrichment of viruses prior to metagenomic virus discovery.

7 July 2018

1 reference

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7 July 2018

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Pandoraviruses: amoeba viruses with genomes up to 2.5 Mb reaching that of parasitic eukaryotes.

7 July 2018

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Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

7 July 2018

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Virus discovery: one step beyond

7 July 2018

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Identification and characterization of a novel adenovirus in the cloacal bursa of gulls

7 July 2018

1 reference

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A novel rhabdovirus associated with acute hemorrhagic fever in central Africa

7 July 2018

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Performance of VIDISCA-454 in feces-suspensions and serum

7 July 2018

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MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads

7 July 2018

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Novel bacterial taxa in the human microbiome

7 July 2018

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Diarrhea etiology in a pediatric emergency department: a case control study

7 July 2018

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7 July 2018

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Assessment of metagenomic assembly using simulated next generation sequencing data

7 July 2018

1 reference

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Untangling genomes from metagenomes: revealing an uncultured class of marine Euryarchaeota

7 July 2018

1 reference

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Insights into antibiotic resistance through metagenomic approaches.

7 July 2018

1 reference

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Metagenomic analysis of the viral flora of pine marten and European badger feces

7 July 2018

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7 July 2018

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7 July 2018

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Genomic analysis identifies association of Fusobacterium with colorectal carcinoma

7 July 2018

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Meta-IDBA: a de Novo assembler for metagenomic data

7 July 2018

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Evaluating the fidelity of de novo short read metagenomic assembly using simulated data

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Diagnostic approaches for patients with suspected encephalitis

7 July 2018

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Whole-genome multiple displacement amplification from single cells

7 July 2018

1 reference

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Use of simulated data sets to evaluate the fidelity of metagenomic processing methods

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4270193

Symbiosis insights through metagenomic analysis of a microbial consortium

7 July 2018

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Cell-free cloning using phi29 DNA polymerase

7 July 2018

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Cloning of a human parvovirus by molecular screening of respiratory tract samples

7 July 2018

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Comprehensive human genome amplification using multiple displacement amplification

7 July 2018

1 reference

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Strategies for the sequence determination of viral dsRNA genomes

7 July 2018

1 reference

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CAP3: A DNA sequence assembly program

7 July 2018

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Novel divergent rhabdovirus in feces of red fox, Spain

7 July 2018

1 reference

https://api.crossref.org/works/10.3389/FMICB.2014.00714

Suppression subtractive hybridisation allows selective sampling of metagenomic subsets of interest

21 January 2018

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https://api.crossref.org/works/10.3389/FMICB.2014.00714

21 January 2018

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Genovo: De Novo Assembly for Metagenomes

21 January 2018

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Isolation of a virus with rhabdovirus morphology from a white-beaked dolphin (Lagenorhynchus albirostris).

21 January 2018

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MetaCAA: A clustering-aided methodology for efficient assembly of metagenomic datasets

21 January 2018

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21 January 2018

Identifiers

DOI

10.3389/FMICB.2014.00714

1 reference

4 August 2017

1 reference

4 August 2017

1 reference