Large favorable enthalpy changes drive specific RNA recognition by RNA recognition motif proteins (Q34630547)

3 August 2017

title

Large favorable enthalpy changes drive specific RNA recognition by RNA recognition motif proteins (English)

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RNA recognition motif domain

3 August 2017

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3

Clara L Kielkopf

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3 August 2017

2

Jermaine L Jenkins

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3 August 2017

Krystle J McLaughlin

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3 August 2017

language of work or name

English

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publication date

2 February 2011

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3 August 2017

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3 August 2017

volume

50

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3 August 2017

issue

9

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3 August 2017

page(s)

1429-1431

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Solution conformation and thermodynamic characteristics of RNA binding by the splicing factor U2AF65

3 August 2017

cites work

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Structure and function of KH domains

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Structural basis for polypyrimidine tract recognition by the essential pre-mRNA splicing factor U2AF65.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Escherichia coli Hfq has distinct interaction surfaces for DsrA, rpoS and poly(A) RNAs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

U2AF homology motifs: protein recognition in the RRM world

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Recognition of the mRNA AU-rich element by the zinc finger domain of TIS11d

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Poly(A)-binding proteins: multifunctional scaffolds for the post-transcriptional control of gene expression

7 July 2018

1 reference

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Insights into ssDNA recognition by the OB fold from a structural and thermodynamic study of Sulfolobus SSB protein

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein

7 July 2018

1 reference

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Structure of the DNA binding domain of E. coli SSB bound to ssDNA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Differential recognition of the polypyrimidine-tract by the general splicing factor U2AF65 and the splicing repressor sex-lethal

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Recognition of polyadenylate RNA by the poly(A)-binding protein

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Structure of the trp RNA-binding attenuation protein, TRAP, bound to RNA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Structural basis for recognition of the tra mRNA precursor by the Sex-lethal protein

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Functional analysis of the polypyrimidine tract in pre-mRNA splicing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Kinetic and thermodynamic analysis of the interaction between TRAP (trp RNA-binding attenuation protein) of Bacillus subtilis and trp leader RNA.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Individual RNA recognition motifs of TIA-1 and TIAR have different RNA binding specificities

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Apparent heat capacity change accompanying a nonspecific protein-DNA interaction. Escherichia coli SSB tetramer binding to oligodeoxyadenylates

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Repeating structure of cytoplasmic poly(A)-ribonucleoprotein

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Characterization of bacteriophage T4 regA protein-nucleic acid interactions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

The multiple RNA-binding domains of the mRNA poly(A)-binding protein have different RNA-binding activities

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

RNA sequence elements required for high affinity binding by the zinc finger domain of tristetraprolin: conformational changes coupled to the bipartite nature of Au-rich MRNA-destabilizing motifs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

RNA target specificity of the STAR/GSG domain post-transcriptional regulatory protein GLD-1.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Specific and non-specific interactions of integration host factor with DNA: thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3050080

Protein−Protein Interactions: Interface Structure, Binding Thermodynamics, and Mutational Analysis

26 October 2018

1 reference

12 December 2020

Energetics of interactions of aromatic hydrocarbons with water

1 reference

12 December 2020

RNA hairpins with non-nucleotide spacers bind efficiently to the human U1A protein

1 reference

12 December 2020

Thermodynamics of single-stranded RNA binding to oligolysines containing tryptophan

1 reference

12 December 2020

Enthalpy and heat capacity changes for the proton dissociation of various buffer components in 0.1 M potassium chloride

1 reference

12 December 2020

Ionization constants and heats of tris(hydroxymethyl)aminomethane and phosphate buffers

1 reference

12 December 2020

Identifiers

DOI

10.1021/BI102057M

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3 August 2017

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3 August 2017

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