Haplotype structure and phenotypic associations in the chromosomal regions surrounding two Arabidopsis thaliana flowering time loci (Q34569687)

3 August 2017

title

Haplotype structure and phenotypic associations in the chromosomal regions surrounding two Arabidopsis thaliana flowering time loci (English)

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3 August 2017

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8

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3 August 2017

Jenny Hagenblad

1

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author name string

Chunlao Tang

2

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3 August 2017

John Molitor

3

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3 August 2017

Jonathan Werner

4

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3 August 2017

Keyan Zhao

5

1 reference

3 August 2017

Honggang Zheng

6

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3 August 2017

Paul Marjoram

7

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3 August 2017

Magnus Nordborg

9

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3 August 2017

language of work or name

English

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publication date

1 November 2004

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3 August 2017

number of pages

12

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based on heuristic

inferred from page(s)

published in

Genetics

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3 August 2017

volume

168

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3 August 2017

issue

3

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3 August 2017

page(s)

1627-1638

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The complex interplay among factors that influence allelic association.

3 August 2017

cites work

1 reference

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The International HapMap Project

7 July 2018

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Fine-scale mapping of disease genes with multiple mutations via spatial clustering techniques

7 July 2018

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Multipoint linkage-disequilibrium mapping narrows location interval and identifies mutation heterogeneity

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Haplotype information and linkage disequilibrium mapping for single nucleotide polymorphisms

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Attenuation of FLOWERING LOCUS C activity as a mechanism for the evolution of summer-annual flowering behavior in Arabidopsis

7 July 2018

1 reference

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The impact of genomics on the study of natural variation in Arabidopsis

7 July 2018

1 reference

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Using haplotype blocks to map human complex trait loci

7 July 2018

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Evidence for population growth in humans is confounded by fine-scale population structure

7 July 2018

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Sequence variation and haplotype structure surrounding the flowering time locus FRI in Arabidopsis thaliana

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Linkage disequilibrium: what history has to tell us.

7 July 2018

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The extent of linkage disequilibrium in Arabidopsis thaliana

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Bayesian analysis of haplotypes for linkage disequilibrium mapping

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

High-resolution multipoint linkage-disequilibrium mapping in the context of a human genome sequence

7 July 2018

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Genomic control for association studies

7 July 2018

1 reference

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Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Data mining applied to linkage disequilibrium mapping

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Association mapping in structured populations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Haplotype fine mapping by evolutionary trees

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

The power of association studies to detect the contribution of candidate genetic loci to variation in complex traits

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Assessment of linkage disequilibrium by the decay of haplotype sharing, with application to fine-scale genetic mapping

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Use of unlinked genetic markers to detect population stratification in association studies.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

FLOWERING LOCUS C encodes a novel MADS domain protein that acts as a repressor of flowering

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Linkage-disequilibrium mapping of disease genes by reconstruction of ancestral haplotypes in founder populations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

The FLF MADS box gene: a repressor of flowering in Arabidopsis regulated by vernalization and methylation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Two sites in the Delta gene region contribute to naturally occurring variation in bristle number in Drosophila melanogaster

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

The transmission/disequilibrium test: history, subdivision, and admixture

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Application of Bayesian spatial statistical methods to analysis of haplotypes effects and gene mapping

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Dopa decarboxylase (Ddc) affects variation in Drosophila longevity

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Analysis of the molecular basis of flowering time variation in Arabidopsis accessions.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Linkage disequilibrium and the mapping of complex human traits

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Blocks of limited haplotype diversity revealed by high-resolution scanning of human chromosome 21.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Linkage disequilibrium, gene trees and selfing: an ancestral recombination graph with partial self-fertilization

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448803

Analysis of flowering time in ecotypes of Arabidopsis thaliana

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15579712

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DNA polymorphism at the FRIGIDA gene in Arabidopsis thaliana: extensive nonsynonymous variation is consistent with local selection for flowering time

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15579712

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1534/GENETICS.104.029470

1 reference

3 August 2017

1 reference

3 August 2017

1 reference