The 5'-HS4 chicken beta-globin insulator is a CTCF-dependent nuclear matrix-associated element (Q34513920)

2 August 2017

title

The 5'-HS4 chicken beta-globin insulator is a CTCF-dependent nuclear matrix-associated element (English)

1 reference

2 August 2017

1

Timur M Yusufzai

1 reference

2 August 2017

Gary Felsenfeld

2

1 reference

2 August 2017

language of work or name

English

0 references

publication date

28 May 2004

1 reference

Proceedings of the National Academy of Sciences of the United States of America

2 August 2017

published in

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2 August 2017

volume

101

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2 August 2017

issue

23

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2 August 2017

page(s)

8620-8624

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CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species

2 August 2017

cites work

1 reference

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Genomic imprinting controls matrix attachment regions in the Igf2 gene

7 July 2018

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Visualization of chromatin domains created by the gypsy insulator of Drosophila

7 July 2018

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The insulator binding protein CTCF associates with the nuclear matrix

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

Long-range chromatin regulatory interactions in vivo

7 July 2018

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Setting the boundaries of chromatin domains and nuclear organization

7 July 2018

1 reference

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Chromatin boundaries in budding yeast: the nuclear pore connection

7 July 2018

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Position-effect protection and enhancer blocking by the chicken beta-globin insulator are separable activities

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

Conserved CTCF insulator elements flank the mouse and human beta-globin loci

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

Insulators: many functions, many mechanisms.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

CTCF, a candidate trans-acting factor for X-inactivation choice

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

DNA supercoiling allows enhancer action over a large distance

7 July 2018

1 reference

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A new look at the nuclear matrix

7 July 2018

1 reference

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CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

7 July 2018

1 reference

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Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

7 July 2018

1 reference

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Looping, linking, and chromatin activity: new insights into beta-globin locus regulation

7 July 2018

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Half a century of "the nuclear matrix"

7 July 2018

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Enhancer blocking by the Drosophila gypsy insulator depends upon insulator anatomy and enhancer strength.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

A Nuclear Matrix/Scaffold Attachment Region Co-localizes with the Gypsy Retrotransposon Insulator Sequence

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

Mathematical model to predict regions of chromatin attachment to the nuclear matrix

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

A 5' element of the chicken beta-globin domain serves as an insulator in human erythroid cells and protects against position effect in Drosophila

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

A drosophila protein that imparts directionality on a chromatin insulator is an enhancer of position-effect variegation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

Organization of the higher-order chromatin loop: specific DNA attachment sites on nuclear scaffold

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

Association of RNA with the cytoskeleton and the nuclear matrix

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sites

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

A comprehensive study on the isolation and characterization of the HeLa S3 nuclear matrix

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

DNA position-specific repression of transcription by a Drosophila zinc finger protein

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

The structure of histone-depleted metaphase chromosomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

A chromatin insulator determines the nuclear localization of DNA.

7 July 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0402938101

CLIMATE CHANGE:The Seesaw Effect

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0402938101

Dynamics of enhancer-promoter communication during differentiation-induced gene activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0402938101

Nuclear location of a chromatin insulator in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0402938101

Both CTCF-dependent and -independent insulators are found between the mouse T cell receptor alpha and Dad1 genes

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

Going the distance: a current view of enhancer action

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=423244

hnRNP proteins and B23 are the major proteins of the internal nuclear matrix of HeLa S3 cells

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15169959

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identification and characterization of a hexameric form of nucleolar phosphoprotein B23

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15169959

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0402938101

1 reference

2 August 2017

0 references

1 reference

2 August 2017

1 reference