The RNA processing enzyme polynucleotide phosphorylase negatively controls biofilm formation by repressing poly-N-acetylglucosamine (PNAG) production in Escherichia coli C. (Q34484395)

From Wikidata

Jump to navigation Jump to search

scientific article

Language	Label	Description	Also known as
English	The RNA processing enzyme polynucleotide phosphorylase negatively controls biofilm formation by repressing poly-N-acetylglucosamine (PNAG) production in Escherichia coli C.	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

The RNA processing enzyme polynucleotide phosphorylase negatively controls biofilm formation by repressing poly-N-acetylglucosamine (PNAG) production in Escherichia coli C. (English)

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

0 references

Escherichia coli

1 reference

based on heuristic

inferred from title

Thomas Carzaniga

object named as

Thomas Carzaniga

1

0 references

Federica Briani

object named as

Federica Briani

4

0 references

object named as

Gianni Dehò

3

0 references

object named as

Paolo Landini

5

0 references

author name string

Davide Antoniani

2

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

publication date

21 November 2012

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

BMC Microbiology

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

12

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

270

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

describes a project that uses

object named as

ImageQuant

2 references

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3571907/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

Genes that influence swarming motility and biofilm formation in Variovorax paradoxus EPS

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Targeting of csgD by the small regulatory RNA RprA links stationary phase, biofilm formation and cell envelope stress in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

The crucial role of PNPase in the degradation of small RNAs that are not associated with Hfq.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

A small RNA that regulates motility and biofilm formation in response to changes in nutrient availability in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Small regulatory RNAs control the multi-cellular adhesive lifestyle of Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Polynucleotide phosphorylase exonuclease and polymerase activities on single-stranded DNA ends are modulated by RecN, SsbA and RecA proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Role of polynucleotide phosphorylase in sRNA function in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Polynucleotide phosphorylase activity may be modulated by metabolites in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Opposing contributions of polynucleotide phosphorylase and the membrane protein NlpI to biofilm formation by Salmonella enterica serovar Typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Pseudomonas aeruginosa biofilm matrix polysaccharide Psl is regulated transcriptionally by RpoS and post-transcriptionally by RsmA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Growth in glucose-based medium and exposure to subinhibitory concentrations of imipenem induce biofilm formation in a multidrug-resistant clinical isolate of Acinetobacter baumannii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Structural and mechanistic determinants of c-di-GMP signalling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Signals, regulatory networks, and materials that build and break bacterial biofilms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Conditional essentiality of the csrA gene in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Polynucleotide phosphorylase hinders mRNA degradation upon ribosomal protein S1 overexpression in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Escherichia coli harboring a natural IncF conjugative F plasmid develops complex mature biofilms by stimulating synthesis of colanic acid and Curli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Regulation of Escherichia coli polynucleotide phosphorylase by ATP.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

RNase activity of polynucleotide phosphorylase is critical at low temperature in Escherichia coli and is complemented by RNase II

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

PNPase is a key player in the regulation of small RNAs that control the expression of outer membrane proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Characterization of the role of ribonucleases in Salmonella small RNA decay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Biofilm formation-gene expression relay system in Escherichia coli: modulation of sigmaS-dependent gene expression by the CsgD regulatory protein via sigmaS protein stabilization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

SadC reciprocally influences biofilm formation and swarming motility via modulation of exopolysaccharide production and flagellar function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

The majority of Escherichia coli mRNAs undergo post-transcriptional modification in exponentially growing cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Comparative genetics of the rdar morphotype in Salmonella

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

The cation-responsive protein NhaR of Escherichia coli activates pgaABCD transcription, required for production of the biofilm adhesin poly-beta-1,6-N-acetyl-D-glucosamine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Identification of a novel regulatory protein (CsrD) that targets the global regulatory RNAs CsrB and CsrC for degradation by RNase E.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

The pgaABCD locus of Escherichia coli promotes the synthesis of a polysaccharide adhesin required for biofilm formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Host controlled variation in bacterial viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

A novel sRNA component of the carbon storage regulatory system of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Vibrio cholerae CytR is a repressor of biofilm development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Immunochemical properties of the staphylococcal poly-N-acetylglucosamine surface polysaccharide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

HbpR, a new member of the XylR/DmpR subclass within the NtrC family of bacterial transcriptional activators, regulates expression of 2-hydroxybiphenyl metabolism in Pseudomonas azelaica HBP1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

THINKING ABOUT BACTERIAL POPULATIONS AS MULTICELLULAR ORGANISMS

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Biofilm susceptibility to bacteriophage attack: the role of phage-borne polysaccharide depolymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Curli fibers are highly conserved between Salmonella typhimurium and Escherichia coli with respect to operon structure and regulation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Polynucleotide phosphorylase of Escherichia coli is required for the establishment of bacteriophage P4 immunity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Proteins associated with RNase E in a multicomponent ribonucleolytic complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Overview of microbial biofilms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

The Escherichia coli K-12 "wild types" W3110 and MG1655 have an rph frameshift mutation that leads to pyrimidine starvation due to low pyrE expression levels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Distribution and diversity of hsd genes in Escherichia coli and other enteric bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Fibronectin binding mediated by a novel class of surface organelles on Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Identification and cloning of a hemin storage locus involved in the pigmentation phenotype of Yersinia pestis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Cellulose biosynthesis and function in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Dissection of IncP conjugative plasmid transfer: definition of the transfer region Tra2 by mobilization of the Tra1 region in trans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

6 July 2018

Global gene expression in Escherichia coli biofilms

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

A characterization of DNA release in Pseudomonas aeruginosa cultures and biofilms

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

AgfD, the checkpoint of multicellular and aggregative behaviour in Salmonella typhimurium regulates at least two independent pathways

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Characterization of starvation-induced dispersion in Pseudomonas putida biofilms

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Copurification of E. coli RNAase E and PNPase: evidence for a specific association between two enzymes important in RNA processing and degradation.

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Involvement of pnp in survival of UV radiation in Escherichia coli K-12

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

The csgD mRNA as a hub for signal integration via multiple small RNAs.

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Effect of growth conditions on poly-N-acetylglucosamine expression and biofilm formation in Escherichia coli

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Analysis of the Escherichia coli RNA degradosome composition by a proteomic approach.

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Cellulose modulates biofilm formation by counteracting curli-mediated colonization of solid surfaces in Escherichia coli.

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

OmpA influences Escherichia coli biofilm formation by repressing cellulose production through the CpxRA two-component system

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

CsrA post-transcriptionally represses pgaABCD, responsible for synthesis of a biofilm polysaccharide adhesin of Escherichia coli

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Genomic analysis in Escherichia coli demonstrates differential roles for polynucleotide phosphorylase and RNase II in mRNA abundance and decay

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Cyclic di-GMP Activation of Polynucleotide Phosphorylase Signal-Dependent RNA Processing

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

The diguanylate cyclase YddV controls production of the exopolysaccharide poly-N-acetylglucosamine (PNAG) through regulation of the PNAG biosynthetic pgaABCD operon

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Polynucleotide phosphorylase-based photometric assay for inorganic phosphate

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

RNase II levels change according to the growth conditions: characterization of gmr, a new Escherichia coli gene involved in the modulation of RNase II.

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Global impact of mature biofilm lifestyle on Escherichia coli K-12 gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

27 October 2018

Complex regulation of csgD promoter activity by global regulatory proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571907

27 October 2018

Developmental pathway for biofilm formation in curli-producing Escherichia coli strains: role of flagella, curli and colanic acid

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Bacteriophage P4 immunity controlled by small RNAs via transcription termination

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Genetic analysis of polynucleotide phosphorylase structure and functions

1 reference

https://api.crossref.org/works/10.1186/1471-2180-12-270

21 January 2018

Polynucleotide phosphorylase, RNase II and RNase E play different roles in the in vivo modulation of polyadenylation in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/23171129

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptional and post-transcriptional control of polynucleotide phosphorylase during cold acclimation in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/23171129

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Growth abnormalities in Hfr Derivatives of Escherichia coli Strain c

1 reference

https://pubmed.ncbi.nlm.nih.gov/23171129

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phage P1 mutants with altered transducing abilities for Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/23171129

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2180-12-270

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

Dimensions Publication ID

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q34484395&oldid=2196693500"