Inhibition of 5'-UTR RNA conformational switching in HIV-1 using antisense PNAs (Q34477931)

2 August 2017

title

Inhibition of 5'-UTR RNA conformational switching in HIV-1 using antisense PNAs (English)

1 reference

2 August 2017

Braham Parkash

1

1 reference

2 August 2017

Atul Ranjan

2

1 reference

2 August 2017

Vinod Tiwari

3

1 reference

2 August 2017

Sharad Kumar Gupta

4

1 reference

2 August 2017

Navrinder Kaur

5

1 reference

2 August 2017

Vibha Tandon

6

1 reference

2 August 2017

language of work or name

English

0 references

publication date

12 November 2012

1 reference

2 August 2017

1 reference

2 August 2017

volume

7

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2 August 2017

issue

11

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2 August 2017

page(s)

e49310

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Creative Commons Attribution 4.0 International

2 August 2017

copyright license

start time

12 November 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Locked nucleic acid containing antisense oligonucleotides enhance inhibition of HIV-1 genome dimerization and inhibit virus replication.

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RNA interactions in the 5' region of the HIV-1 genome

6 July 2018

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The dimer initiation sequence stem-loop of human immunodeficiency virus type 1 is dispensable for viral replication in peripheral blood mononuclear cells.

6 July 2018

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Template dimerization promotes an acceptor invasion-induced transfer mechanism during human immunodeficiency virus type 1 minus-strand synthesis

6 July 2018

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Possible role of dimerization in human immunodeficiency virus type 1 genome RNA packaging

6 July 2018

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Dimerization and template switching in the 5' untranslated region between various subtypes of human immunodeficiency virus type 1.

6 July 2018

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RNA structure and packaging signals in the 5' leader region of the human immunodeficiency virus type 1 genome

6 July 2018

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In vitro evidence that the untranslated leader of the HIV-1 genome is an RNA checkpoint that regulates multiple functions through conformational changes

6 July 2018

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In vitro evidence for a long range pseudoknot in the 5'-untranslated and matrix coding regions of HIV-1 genomic RNA

6 July 2018

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Role of stem B, loop B, and nucleotides next to the primer binding site and the kissing-loop domain in human immunodeficiency virus type 1 replication and genomic-RNA dimerization

6 July 2018

1 reference

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Structural features in the HIV-1 repeat region facilitate strand transfer during reverse transcription

6 July 2018

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Role of distal zinc finger of nucleocapsid protein in genomic RNA dimerization of human immunodeficiency virus type 1; no role for the palindrome crowning the R-U5 hairpin

6 July 2018

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Two alternating structures of the HIV-1 leader RNA

6 July 2018

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Impact of human immunodeficiency virus type 1 RNA dimerization on viral infectivity and of stem-loop B on RNA dimerization and reverse transcription and dissociation of dimerization from packaging

6 July 2018

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The leader of the HIV-1 RNA genome forms a compactly folded tertiary structure

6 July 2018

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HIV-1 reverse transcription: a brief overview focused on structure-function relationships among molecules involved in initiation of the reaction

6 July 2018

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Oligonucleotide-mediated inhibition of genomic RNA dimerization of HIV-1 strains MAL and LAI: a comparative analysis

6 July 2018

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Functional analysis of the core human immunodeficiency virus type 1 packaging signal in a permissive cell line

6 July 2018

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Mutations in the kissing-loop hairpin of human immunodeficiency virus type 1 reduce viral infectivity as well as genomic RNA packaging and dimerization

6 July 2018

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A dual role of the putative RNA dimerization initiation site of human immunodeficiency virus type 1 in genomic RNA packaging and proviral DNA synthesis

6 July 2018

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Role of the DIS hairpin in replication of human immunodeficiency virus type 1

6 July 2018

1 reference

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Structure and function of the human immunodeficiency virus leader RNA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495914

A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495914

Maturation of dimeric viral RNA of Moloney murine leukemia virus.

6 July 2018

1 reference

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Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495914

PNA hybridizes to complementary oligonucleotides obeying the Watson–Crick hydrogen-bonding rules

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495914

Inhibition of human immunodeficiency virus replication by antisense oligodeoxynucleotides

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495914

Inhibition of human immunodeficiency virus in early infected and chronically infected cells by antisense oligodeoxynucleotides and their phosphorothioate analogues

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495914

The human immunodeficiency virus type 1 packaging signal and major splice donor region have a conserved stable secondary structure

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495914

Structure, Replication, and Recombination of Retrovirus Genomes: Some Unifying Hypotheses

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495914

Mapping of poly(A) sequences in the electron microscope reveals unusual structure of type C oncornavirus RNA molecules

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495914

Cis elements and trans-acting factors involved in the RNA dimerization of the human immunodeficiency virus HIV-1.

6 July 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0049310

Functional sites in the 5' region of human immunodeficiency virus type 1 RNA form defined structural domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0049310

A novel long distance base-pairing interaction in human immunodeficiency virus type 1 RNA occludes the Gag start codon

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0049310

A 19-nucleotide sequence upstream of the 5' major splice donor is part of the dimerization domain of human immunodeficiency virus 1 genomic RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0049310

Dominant role of the 5' TAR bulge in dimerization of HIV-1 genomic RNA, but no evidence of TAR-TAR kissing during in vivo virus assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0049310

Peptide nucleic acids and their potential applications in biotechnology

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0049310

Mutational analysis of the bipartite dimer linkage structure of human immunodeficiency virus type 1 genomic RNA.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495914

Ultrastructure of HIV-1 genomic RNA

27 October 2018

1 reference

12 December 2020

The HIV-1 leader RNA conformational switch regulates RNA dimerization but does not regulate mRNA translation

1 reference

12 December 2020

Formation of immature and mature genomic RNA dimers in wild-type and protease-inactive HIV-1: Differential roles of the Gag polyprotein, nucleocapsid proteins NCp15, NCp9, NCp7, and the dimerization initiation site

1 reference

12 December 2020

Stability of peptide nucleic acids in human serum and cellular extracts

1 reference

12 December 2020

Dimerization of HIV-1Lai RNA at low ionic strength. An autocomplementary sequence in the 5' leader region is evidenced by an antisense oligonucleotide

1 reference

12 December 2020

A kissing complex together with a stable dimer is involved in the HIV-1Lai RNA dimerization process in vitro

1 reference

12 December 2020

Mechanisms of Inhibition ofin VitroDimerization of HIV Type I RNA by Sense and Antisense Oligonucleotides

1 reference

12 December 2020

Inhibition of HIV type 1 RNA dimerization by antisense DNA corresponding to the 17-nucleotide sequence downstream from the splice donor site of HIV type 1 RNA

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0049310

Identifiers

DOI

1 reference

2 August 2017

0 references

1 reference

2 August 2017

1 reference