The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts (Q34433472)

2 August 2017

title

The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts (English)

1 reference

2 August 2017

1

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3 June 2020

Marie Touchon

series ordinal

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120263 AND SRC:MED&resulttype=core&format=json

3 June 2020

Eduardo Rocha

series ordinal

3

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3 June 2020

author name string

Marie Touchon

series ordinal

2

1 reference

2 August 2017

language of work or name

English

0 references

publication date

12 August 2014

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2 August 2017

published in

Nucleic Acids Research

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120263 AND SRC:MED&resulttype=core&format=json

3 June 2020

volume

42

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120263 AND SRC:MED&resulttype=core&format=json

3 June 2020

issue

16

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120263 AND SRC:MED&resulttype=core&format=json

3 June 2020

page(s)

10618-10631

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120263 AND SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

3 June 2020

copyright license

start time

3 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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6 July 2018

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Defense islands in bacterial and archaeal genomes and prediction of novel defense systems

6 July 2018

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The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation

6 July 2018

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6 July 2018

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Domain movement within a gene: a novel evolutionary mechanism for protein diversification.

6 July 2018

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6 July 2018

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Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination

6 July 2018

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6 July 2018

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6 July 2018

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Fused eco29kIR- and Mgenes coding for a fully functional hybrid polypeptide as a model of molecular evolution of restriction-modification systems

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Genome comparison and context analysis reveals putative mobile forms of restriction-modification systems and related rearrangements

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

CRISPR-based adaptive and heritable immunity in prokaryotes

6 July 2018

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The MmeI family: type II restriction-modification enzymes that employ single-strand modification for host protection

6 July 2018

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Cleavage of a model DNA replication fork by a Type I restriction endonuclease.

6 July 2018

1 reference

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Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

6 July 2018

1 reference

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Cell death upon epigenetic genome methylation: a novel function of methyl-specific deoxyribonucleases

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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A new integrative conjugative element occurs in Mycoplasma agalactiae as chromosomal and free circular forms

6 July 2018

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6 July 2018

1 reference

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Mechanisms of, and barriers to, horizontal gene transfer between bacteria

6 July 2018

1 reference

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DNA uptake during bacterial transformation

6 July 2018

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A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes

6 July 2018

1 reference

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Evidence for horizontal transfer of the EcoT38I restriction-modification gene to chromosomal DNA by the P2 phage and diversity of defective P2 prophages in Escherichia coli TH38 strains

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

Comparative analysis of superintegrons: engineering extensive genetic diversity in the Vibrionaceae

6 July 2018

1 reference

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Helicobacter pylori interstrain restriction-modification diversity prevents genome subversion by chromosomal DNA from competing strains

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

Prokaryotic evolution in light of gene transfer

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

A DNA methyltransferase can protect the genome from postdisturbance attack by a restriction-modification gene complex.

6 July 2018

1 reference

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An efficient algorithm for large-scale detection of protein families

6 July 2018

1 reference

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Natural transformation competence in Helicobacter pylori is mediated by the basic components of a type IV secretion system

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

Characterization of a novel type II restriction-modification system, Sth368I, encoded by the integrative element ICESt1 of Streptococcus thermophilus CNRZ368

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

Comparative genomics of the restriction-modification systems in Helicobacter pylori

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

The evolutionary history of chromosomal super-integrons provides an ancestry for multiresistant integrons.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

Identification of type II restriction and modification systems in Helicobacter pylori reveals their substantial diversity among strains

6 July 2018

1 reference

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Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

6 July 2018

1 reference

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Shaping the genome--restriction-modification systems as mobile genetic elements.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

A family of phase-variable restriction enzymes with differing specificities generated by high-frequency gene rearrangements

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

Horizontal gene transfer contributes to the wide distribution and evolution of type II restriction-modification systems

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

Selfish behavior of restriction-modification systems

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

DNA restriction-modification systems mediate plasmid maintenance

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

Modified bases in bacteriophage DNAs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

Bacteriophage survival: multiple mechanisms for avoiding the deoxyribonucleic acid restriction systems of their hosts

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

DNA modification and restriction

6 July 2018

1 reference

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Cloning and sequence analysis of the genes coding for Eco57I type IV restriction-modification enzymes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176335

Diversity of restriction-modification gene homologues in Helicobacter pylori.

6 July 2018

1 reference

Proteome variability among Helicobacter pylori isolates clustered according to genomic methylation

21 January 2018

1 reference

Combinational variation of restriction modification specificities in Lactococcus lactis

21 January 2018

1 reference

DNA binding-uptake system: a link between cell-to-cell communication and biofilm formation

21 January 2018

1 reference

An orphan DNA (cytosine-5-)-methyltransferase in Vibrio cholerae.

21 January 2018

1 reference

Engineering of restriction endonucleases: using methylation activity of the bifunctional endonuclease Eco57I to select the mutant with a novel sequence specificity

21 January 2018

1 reference

Evolutionary dynamics of restriction site avoidance.

21 January 2018

1 reference

Evolutionary Role of Restriction/Modification Systems as Revealed by Comparative Genome Analysis

21 January 2018

1 reference

Evolutionary role of restriction/modification systems as revealed by comparative genome analysis

21 January 2018

1 reference

12 December 2020

Experimental genome evolution: large-scale genome rearrangements associated with resistance to replacement of a chromosomal restriction-modification gene complex

1 reference

12 December 2020

A restriction endonuclease analysis of the bacterial plasmid controlling the ecoRI restriction and modification of DNA

1 reference

12 December 2020

Sensitivity of naturally occurring coliphages to type I and type II restriction and modification

1 reference

12 December 2020

Evolution of paralogous genes: Reconstruction of genome rearrangements through comparison of multiple genomes within Staphylococcus aureus

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKU734

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120263 AND SRC:MED&resulttype=core&format=json

3 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120263 AND SRC:MED&resulttype=core&format=json

3 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25120263 AND SRC:MED&resulttype=core&format=json