p15PAF is an intrinsically disordered protein with nonrandom structural preferences at sites of interaction with other proteins. (Q34406035)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24559989 AND SRC:MED&resulttype=core&format=json

8 March 2020

title

p15PAF is an intrinsically disordered protein with nonrandom structural preferences at sites of interaction with other proteins (English)

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8 March 2020

1

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8 March 2020

Tiago N Cordeiro

3

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8 March 2020

Tiago N Cordeiro

4

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8 March 2020

Nathalie Sibille

7

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8 March 2020

Moreno Lelli

8

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8 March 2020

Tammo Diercks

9

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8 March 2020

Pau Bernadó

10

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8 March 2020

Francisco J. Blanco

11

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8 March 2020

author name string

Alain Ibáñez de Opakua

2

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8 March 2020

Maider Villate

5

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8 March 2020

Nekane Merino

6

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8 March 2020

language of work or name

English

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publication date

1 February 2014

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8 March 2020

number of pages

10

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inferred from page(s)

published in

Biophysical Journal

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8 March 2020

volume

106

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8 March 2020

issue

4

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8 March 2020

page(s)

865-874

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pE-DB: a database of structural ensembles of intrinsically disordered and of unfolded proteins

8 March 2020

cites work

1 reference

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p15(PAF) is an Rb/E2F-regulated S-phase protein essential for DNA synthesis and cell cycle progression

6 July 2018

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Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass

6 July 2018

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Structural characterization of intrinsically disordered proteins by the combined use of NMR and SAXS.

6 July 2018

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A preformed binding interface in the unbound ensemble of an intrinsically disordered protein: evidence from molecular simulations

6 July 2018

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Variant 1 of KIAA0101, overexpressed in hepatocellular carcinoma, prevents doxorubicin-induced apoptosis by inhibiting p53 activation

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Ensemble modeling of protein disordered states: experimental restraint contributions and validation

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Structural analysis of intrinsically disordered proteins by small-angle X-ray scattering

6 July 2018

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Proliferating cell nuclear antigen (PCNA)-associated KIAA0101/PAF15 protein is a cell cycle-regulated anaphase-promoting complex/cyclosome substrate

6 July 2018

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Intrinsically Disordered Proteins in a Physics-Based World

6 July 2018

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Intrinsic disorder in measles virus nucleocapsids.

6 July 2018

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PCNA directs type 2 RNase H activity on DNA replication and repair substrates

6 July 2018

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Sequence-Specific Random Coil Chemical Shifts of Intrinsically Disordered Proteins

6 July 2018

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A self-consistent description of the conformational behavior of chemically denatured proteins from NMR and small angle scattering.

6 July 2018

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ANCHOR: web server for predicting protein binding regions in disordered proteins.

6 July 2018

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Conformational selection or induced fit: a flux description of reaction mechanism

6 July 2018

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ATF3 and p15PAF are novel gatekeepers of genomic integrity upon UV stress

6 July 2018

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Linking folding and binding

6 July 2018

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Fuzzy complexes: polymorphism and structural disorder in protein-protein interactions

6 July 2018

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Structural characterization of flexible proteins using small-angle X-ray scattering

6 July 2018

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Oncogenic role of KIAA0101 interacting with proliferating cell nuclear antigen in pancreatic cancer

6 July 2018

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Atomic-level characterization of disordered protein ensembles

6 July 2018

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A flexible interface between DNA ligase and PCNA supports conformational switching and efficient ligation of DNA.

6 July 2018

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Intrinsic disorder in transcription factors

6 July 2018

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A structural model for unfolded proteins from residual dipolar couplings and small-angle x-ray scattering.

6 July 2018

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6 July 2018

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Structural basis for recruitment of human flap endonuclease 1 to PCNA

6 July 2018

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Structural and thermodynamic analysis of human PCNA with peptides derived from DNA polymerase-delta p66 subunit and flap endonuclease-1.

6 July 2018

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6 July 2018

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6 July 2018

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Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life

6 July 2018

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6 July 2018

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6 July 2018

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Natively unfolded proteins: a point where biology waits for physics

6 July 2018

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p15(PAF), a novel PCNA associated factor with increased expression in tumor tissues

6 July 2018

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Why are "natively unfolded" proteins unstructured under physiologic conditions?

6 July 2018

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The KEN box: an APC recognition signal distinct from the D box targeted by Cdh1

6 July 2018

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Stable proline box motif at the N-terminal end of alpha-helices

6 July 2018

1 reference

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Structural studies of p21Waf1/Cip1/Sdi1 in the free and Cdk2-bound state: conformational disorder mediates binding diversity

6 July 2018

1 reference

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Structure of the C-terminal region of p21(WAF1/CIP1) complexed with human PCNA

6 July 2018

1 reference

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1H, 13C and 15N chemical shift referencing in biomolecular NMR

6 July 2018

1 reference

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1H, 13C and 15N random coil NMR chemical shifts of the common amino acids. I. Investigations of nearest-neighbor effects

6 July 2018

1 reference

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Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation

6 July 2018

1 reference

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Cyclin is degraded by the ubiquitin pathway

6 July 2018

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Automated sample-changing robot for solution scattering experiments at the EMBL Hamburg SAXS station X33.

6 July 2018

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Size-exclusion chromatography in structural analysis of intrinsically disordered proteins

27 October 2018

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Flexible-meccano: a tool for the generation of explicit ensemble descriptions of intrinsically disordered proteins and their associated experimental observables.

27 October 2018

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Intrinsic Disorder in Ubiquitination Substrates

27 October 2018

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Random coil chemical shift for intrinsically disordered proteins: effects of temperature and pH.

27 October 2018

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Prediction of disordered regions in proteins based on the meta approach

27 October 2018

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NMR: prediction of molecular alignment from structure using the PALES software

27 October 2018

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Structural characterization of unfolded states of apomyoglobin using residual dipolar couplings

27 October 2018

1 reference

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Simultaneous assignment and structure determination of protein backbones by using NMR dipolar couplings

27 October 2018

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On the origin of residual dipolar couplings from denatured proteins

27 October 2018

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A software tool for the prediction of Xaa-Pro peptide bond conformations in proteins based on 13C chemical shift statistics

27 October 2018

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Sequence-dependent correction of random coil NMR chemical shifts

27 October 2018

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A simple apparatus for generating stretched polyacrylamide gels, yielding uniform alignment of proteins and detergent micelles

27 October 2018

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12 December 2020

Overexpression of KIAA0101 predicts poor prognosis in primary lung cancer patients

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12 December 2020

Synergistic folding of two intrinsically disordered proteins: searching for conformational selection

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12 December 2020

Amino acid bulkiness defines the local conformations and dynamics of natively unfolded alpha-synuclein and tau

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12 December 2020

10.1016/J.BPJ.2013.12.046

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24559989 AND SRC:MED&resulttype=core&format=json

8 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24559989 AND SRC:MED&resulttype=core&format=json

8 March 2020

PubMed publication ID

24559989

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24559989 AND SRC:MED&resulttype=core&format=json