Cohesin Proteins Promote Ribosomal RNA Production and Protein Translation in Yeast and Human Cells (Q34311599)

1 August 2017

title

Cohesin proteins promote ribosomal RNA production and protein translation in yeast and human cells (English)

1 reference

1 August 2017

Cohesin Proteins Promote Ribosomal RNA Production and Protein Translation in Yeast and Human Cells (English)

1 reference

10.1371/JOURNAL.PGEN.1002749

DOI

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

4 January 2025

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

4 January 2025

craniofacial abnormality

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

4 January 2025

ectromelia

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

4 January 2025

cell cycle proteins

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

Saccharomyces cerevisiae proteins

4 January 2025

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

non-histone chromosomal proteins

4 January 2025

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

basic-leucine zipper transcription factors

4 January 2025

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

4 January 2025

5

Bethany Harris

1 reference

1 August 2017

4

Baoshan Xu

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

4 January 2025

7

Jay Unruh

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

4 January 2025

Sreekumar Ramachandran

13

object named as

Sree Ramachandran

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

4 January 2025

author name string

Tania Bose

1

1 reference

1 August 2017

Shuai Lu

3

1 reference

1 August 2017

Brian Slaughter

6

1 reference

1 August 2017

Alexander Garrett

8

1 reference

1 August 2017

William McDowell

9

1 reference

1 August 2017

Andrew Box

10

1 reference

1 August 2017

Hua Li

11

1 reference

1 August 2017

Allison Peak

12

1 reference

1 August 2017

Chris Seidel

14

1 reference

1 August 2017

Kenneth K. Lee

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

4 January 2025

Jennifer L. Gerton

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

4 January 2025

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22719263

4 January 2025

publication date

14 June 2012

1 reference

full work available at URL

1 August 2017

https://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.1002749&type=printable

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

https://europepmc.org/articles/PMC3375231

4 January 2025

file format

HyperText Markup Language

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

https://europepmc.org/articles/PMC3375231?pdf=render

4 January 2025

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22719263

http://dx.plos.org/10.1371/journal.pgen.1002749

4 January 2025

1 reference

10.1371/JOURNAL.PGEN.1002749

DOI

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

4 January 2025

1 reference

1 August 2017

volume

8

1 reference

1 August 2017

issue

6

1 reference

1 August 2017

page(s)

e1002749

1 reference

Creative Commons Attribution 4.0 International

1 August 2017

copyright license

start time

14 June 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

limma

object named as

limma

2 references

22 June 2022

https://europepmc.org/article/PMC/3375231

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Cohesin selectively binds and regulates genes with paused RNA polymerase

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A zebrafish model of Roberts syndrome reveals that Esco2 depletion interferes with development by disrupting the cell cycle

6 July 2018

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6 July 2018

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Hos1 Is a Lysine Deacetylase for the Smc3 Subunit of Cohesin

6 July 2018

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6 July 2018

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6 July 2018

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Positive regulation of c-Myc by cohesin is direct, and evolutionarily conserved

6 July 2018

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Transcript counting in single cells reveals dynamics of rDNA transcription

6 July 2018

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Systematic analysis of genome-wide fitness data in yeast reveals novel gene function and drug action

6 July 2018

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6 July 2018

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Cohesinopathy mutations disrupt the subnuclear organization of chromatin

6 July 2018

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Cohesin acetylation speeds the replication fork

6 July 2018

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6 July 2018

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Multiple organ system defects and transcriptional dysregulation in the Nipbl( /-) mouse, a model of Cornelia de Lange Syndrome

6 July 2018

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The cellular phenotype of Roberts syndrome fibroblasts as revealed by ectopic expression of ESCO2

6 July 2018

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Regulation of the Drosophila Enhancer of split and invected-engrailed gene complexes by sister chromatid cohesion proteins

6 July 2018

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Transcriptional dysregulation in NIPBL and cohesin mutant human cells

6 July 2018

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How cohesin and CTCF cooperate in regulating gene expression

6 July 2018

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The Paf1 complex is required for efficient transcription elongation by RNA polymerase I

6 July 2018

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Cdc14 inhibits transcription by RNA polymerase I during anaphase

6 July 2018

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Cohesin and human disease

6 July 2018

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Identification of cis-acting sites for condensin loading onto budding yeast chromosomes

6 July 2018

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Eco1-dependent cohesin acetylation during establishment of sister chromatid cohesion

6 July 2018

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Acetylation of Smc3 by Eco1 is required for S phase sister chromatid cohesion in both human and yeast

6 July 2018

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Mutations in cohesin complex members SMC3 and SMC1A cause a mild variant of cornelia de Lange syndrome with predominant mental retardation

6 July 2018

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The transcriptional activity of RNA polymerase I is a key determinant for the level of all ribosome components

6 July 2018

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

6 July 2018

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6 July 2018

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Inactivating mutations in ESCO2 cause SC phocomelia and Roberts syndrome: no phenotype-genotype correlation

6 July 2018

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Modulation of yeast genome expression in response to defective RNA polymerase III-dependent transcription.

6 July 2018

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Translational regulation of GCN4 and the general amino acid control of yeast

6 July 2018

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Condensin binding at distinct and specific chromosomal sites in the Saccharomyces cerevisiae genome

6 July 2018

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Roberts syndrome is caused by mutations in ESCO2, a human homolog of yeast ECO1 that is essential for the establishment of sister chromatid cohesion

6 July 2018

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Silencing near tRNA genes requires nucleolar localization.

6 July 2018

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Genome-wide mapping of the cohesin complex in the yeast Saccharomyces cerevisiae

6 July 2018

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Cornelia de Lange syndrome is caused by mutations in NIPBL, the human homolog of Drosophila melanogaster Nipped-B

6 July 2018

1 reference

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NIPBL, encoding a homolog of fungal Scc2-type sister chromatid cohesion proteins and fly Nipped-B, is mutated in Cornelia de Lange syndrome

6 July 2018

1 reference

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6 July 2018

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6 July 2018

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Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association

6 July 2018

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Sister chromatid cohesion is required for postreplicative double-strand break repair in Saccharomyces cerevisiae.

6 July 2018

1 reference

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Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Pds5 cooperates with cohesin in maintaining sister chromatid cohesion.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Genomic expression programs in the response of yeast cells to environmental changes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Chromosomal addresses of the cohesin component Mcd1p

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Pds5p is an essential chromosomal protein required for both sister chromatid cohesion and condensation in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Cohesin's binding to chromosomes depends on a separate complex consisting of Scc2 and Scc4 proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Nipped-B, a Drosophila homologue of chromosomal adherins, participates in activation by remote enhancers in the cut and Ultrabithorax genes.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Conserved bipartite motifs in yeast eIF5 and eIF2Bepsilon, GTPase-activating and GDP-GTP exchange factors in translation initiation, mediate binding to their common substrate eIF2.

6 July 2018

1 reference

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A novel in vivo assay reveals inhibition of ribosomal nuclear export in ran-cycle and nucleoporin mutants

6 July 2018

1 reference

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A direct link between sister chromatid cohesion and chromosome condensation revealed through the analysis of MCD1 in S. cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Holliday junctions accumulate in replication mutants via a RecA homolog-independent mechanism

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

An unusual form of transcriptional silencing in yeast ribosomal DNA

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Chromatin structures and transcription of rDNA in yeast Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Effect of initiation factor eIF-5A depletion on protein synthesis and proliferation of Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

A segment of GCN4 mRNA containing the upstream AUG codons confers translational control upon a heterologous yeast transcript

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Ribosome association of GCN2 protein kinase, a translational activator of the GCN4 gene of Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Phosphorylation of initiation factor 2 alpha by protein kinase GCN2 mediates gene-specific translational control of GCN4 in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3375231

Scc2 couples replication licensing to sister chromatid cohesion in Xenopus egg extracts

6 July 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

Recruitment of Xenopus Scc2 and cohesin to chromatin requires the pre-replication complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

Building sister chromatid cohesion: smc3 acetylation counteracts an antiestablishment activity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

X-linked Cornelia de Lange syndrome owing to SMC1L1 mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

UsingGCN4as a Reporter of eIF2α Phosphorylation and Translational Regulation in Yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

Yeast phenotypic assays on translational control

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

Condensin-dependent rDNA decatenation introduces a temporal pattern to chromosome segregation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

Abundance of ribosomal RNA gene copies maintains genome integrity

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

Cohesins coordinate gene transcriptions of related function within Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

Cis-interactions between non-coding ribosomal spacers dependent on RNAP-II separate RNAP-I and RNAP-III transcription domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002749

10.1371/JOURNAL.PGEN.1002749

21 January 2018

Identifiers

DOI

1 reference

1 August 2017

1 reference

1 August 2017

1 reference