Characterisation of QTL-linked and genome-wide restriction site-associated DNA (RAD) markers in farmed Atlantic salmon. (Q34306160)

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5 February 2020

title

Characterisation of QTL-linked and genome-wide restriction site-associated DNA (RAD) markers in farmed Atlantic salmon (English)

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5 February 2020

12

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5 February 2020

John W Davey

2

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5 February 2020

Alastair Hamilton

6

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5 February 2020

Mark Blaxter

10

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5 February 2020

John B. Taggart

13

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5 February 2020

author name string

Ross D Houston

1

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5 February 2020

Stephen C Bishop

3

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5 February 2020

Natalie R Lowe

4

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5 February 2020

Jose C Mota-Velasco

5

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5 February 2020

Derrick R Guy

7

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5 February 2020

Alan E Tinch

8

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5 February 2020

Marian L Thomson

9

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5 February 2020

Karim Gharbi

11

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5 February 2020

language of work or name

English

0 references

publication date

15 June 2012

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5 February 2020

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5 February 2020

volume

13

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5 February 2020

page(s)

244

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Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences

5 February 2020

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A dense SNP-based linkage map for Atlantic salmon (Salmo salar) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns

6 July 2018

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SNP discovery and genotyping for evolutionary genetics using RAD sequencing

6 July 2018

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A conserved haplotype controls parallel adaptation in geographically distant salmonid populations

6 July 2018

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Genome Evolution and Meiotic Maps by Massively Parallel DNA Sequencing: Spotted Gar, an Outgroup for the Teleost Genome Duplication

6 July 2018

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6 July 2018

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Linkage mapping and comparative genomics using next-generation RAD sequencing of a non-model organism

6 July 2018

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Local de novo assembly of RAD paired-end contigs using short sequencing reads

6 July 2018

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6 July 2018

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Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout

6 July 2018

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Sequencing the genome of the Atlantic salmon (Salmo salar).

6 July 2018

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Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

6 July 2018

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Single nucleotide polymorphism discovery in rainbow trout by deep sequencing of a reduced representation library

6 July 2018

1 reference

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Assignment of Atlantic salmon (Salmo salar) linkage groups to specific chromosomes: conservation of large syntenic blocks corresponding to whole chromosome arms in rainbow trout (Oncorhynchus mykiss)

6 July 2018

1 reference

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Confirmation and fine-mapping of a major QTL for resistance to infectious pancreatic necrosis in Atlantic salmon (Salmo salar): population-level associations between markers and trait

6 July 2018

1 reference

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Genetic dissection of MHC-associated susceptibility to Lepeophtheirus salmonis in Atlantic salmon

6 July 2018

1 reference

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Rapid SNP discovery and genetic mapping using sequenced RAD markers

6 July 2018

1 reference

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A linkage map of the Atlantic salmon (Salmo salar) based on EST-derived SNP markers

6 July 2018

1 reference

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Major quantitative trait loci affect resistance to infectious pancreatic necrosis in Atlantic salmon (Salmo salar).

6 July 2018

1 reference

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Bursts and horizontal evolution of DNA transposons in the speciation of pseudotetraploid salmonids

6 July 2018

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Clustal W and Clustal X version 2.0

6 July 2018

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Mapping of a quantitative trait locus for resistance against infectious salmon anaemia in Atlantic salmon (Salmo salar): comparing survival analysis with analysis on affected/resistant data.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3520118

Infectious pancreatic necrosis in Atlantic salmon, Salmo salar L.

6 July 2018

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A physical map of the genome of Atlantic salmon, Salmo salar

6 July 2018

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Managing to harvest? Perspectives on the potential of aquaculture

6 July 2018

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A microsatellite linkage map for Atlantic salmon (Salmo salar).

6 July 2018

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Primer3 on the WWW for general users and for biologist programmers

6 July 2018

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Secondary tetrasomic segregation of MDH-B and preferential pairing of homeologues in rainbow trout

6 July 2018

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Meiotic models to explain classical linkage, pseudolinkage, and chromosome pairing in tetraploid derivative salmonid genomes

6 July 2018

1 reference

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A linkage map of Atlantic salmon (Salmo salar) reveals an uncommonly large difference in recombination rate between the sexes.

6 July 2018

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RADSeq: next-generation population genetics

21 January 2018

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The susceptibility of Atlantic salmon fry to freshwater infectious pancreatic necrosis is largely explained by a major QTL.

21 January 2018

1 reference

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Segregation of infectious pancreatic necrosis resistance QTL in the early life cycle of Atlantic Salmon (Salmo salar).

21 January 2018

1 reference

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A comparative analysis of the rainbow trout genome with 2 other species of fish (Arctic charr and Atlantic salmon) within the tetraploid derivative Salmonidae family (subfamily: Salmoninae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1471-2164-13-244

Detection and confirmation of a major QTL affecting resistance to infectious pancreatic necrosis (IPN) in Atlantic salmon (Salmo salar).

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3520118

Analysis of the incidence of infectious pancreatic necrosis mortality in pedigreed Atlantic salmon, Salmo salar L., populations.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3520118

Identification of genetic markers associated with Gyrodactylus salaris resistance in Atlantic salmon Salmo salar

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3520118

Chromosome relationships in the genus Salmo

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22702806

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-13-244

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22702806 AND SRC:MED&resulttype=core&format=json

5 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22702806 AND SRC:MED&resulttype=core&format=json

5 February 2020

PubMed publication ID

22702806

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22702806 AND SRC:MED&resulttype=core&format=json