Rational design of ¹³C-labeling experiments for metabolic flux analysis in mammalian cells (Q34271662)

1 August 2017

title

Rational design of ¹³C-labeling experiments for metabolic flux analysis in mammalian cells (English)

1 reference

1 August 2017

1 reference

Scott B Crown

1

1 reference

1 August 2017

Woo Suk Ahn

series ordinal

2

1 reference

1 August 2017

Maciek R Antoniewicz

series ordinal

3

1 reference

1 August 2017

publication date

16 May 2012

1 reference

1 August 2017

1 reference

1 August 2017

volume

6

1 reference

1 August 2017

page(s)

43

1 reference

Predicting outcomes of steady-state ¹³C isotope tracing experiments using Monte Carlo sampling

1 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Optimization of 13C isotopic tracers for metabolic flux analysis in mammalian cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Towards dynamic metabolic flux analysis in CHO cell cultures

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Eukaryotic metabolism: measuring compartment fluxes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Metabolic flux analysis of CHO cells at growth and non-growth phases using isotopic tracers and mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Computational approaches in metabolic engineering

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Metabolic Flux Analysis in Systems Biology of Mammalian Cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Ketogenic essential amino acids modulate lipid synthetic pathways and prevent hepatic steatosis in mice

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Metabolic flux analysis in eukaryotes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Metabolic flux analysis and pharmaceutical production

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Metabolic flux analysis in mammalian cell culture

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Effect of anaplerotic fluxes and amino acid availability on hepatic lipoapoptosis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Evaluation of 13C isotopic tracers for metabolic flux analysis in mammalian cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Quantifying reductive carboxylation flux of glutamine to lipid in a brown adipocyte cell line

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Cytosolic phosphoenolpyruvate carboxykinase does not solely control the rate of hepatic gluconeogenesis in the intact mouse liver

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Metabolic flux analysis in a nonstationary system: fed-batch fermentation of a high yielding strain of E. coli producing 1,3-propanediol

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Metabolic networks in motion: 13C-based flux analysis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Elementary metabolite units (EMU): a novel framework for modeling isotopic distributions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Impaired tricarboxylic acid cycle activity in mouse livers lacking cytosolic phosphoenolpyruvate carboxykinase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Metabolic flux analysis using mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Metabolic fluxes and metabolic engineering

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Methods for measuring gluconeogenesis in vivo

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Biosynthetically directed fractional 13C-labeling of proteinogenic amino acids. An efficient analytical tool to investigate intermediary metabolism.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

(13)C-based metabolic flux analysis.

6 July 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

Accurate assessment of amino acid mass isotopomer distributions for metabolic flux analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

Measuring deuterium enrichment of glucose hydrogen atoms by gas chromatography/mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

13C isotopomer analysis of glutamate by tandem mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

Dynamic metabolic flux analysis (DMFA): a framework for determining fluxes at metabolic non-steady state

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

Metabolic flux analysis of CHO cell metabolism in the late non-growth phase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

Computational tools for isotopically instationary 13C labeling experiments under metabolic steady state conditions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

Respirometric 13C flux analysis, Part I: design, construction and validation of a novel multiple reactor system using on-line membrane inlet mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

Theoretical aspects of 13C metabolic flux analysis with sole quantification of carbon dioxide labeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

Experimental design principles for isotopically instationary 13C labeling experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

An elementary metabolite unit (EMU) based method of isotopically nonstationary flux analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

Determination of confidence intervals of metabolic fluxes estimated from stable isotope measurements

21 January 2018

1 reference

https://api.crossref.org/works/10.1186/1752-0509-6-43

Bidirectional reaction steps in metabolic networks: IV. Optimal design of isotopomer labeling experiments.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3490712

Selection of tracers for 13C-metabolic flux analysis using elementary metabolite units (EMU) basis vector methodology

28 October 2018

1 reference

12 December 2020

Resolving the TCA cycle and pentose-phosphate pathway of Clostridium acetobutylicum ATCC 824: Isotopomer analysis, in vitro activities and expression analysis.

1 reference

12 December 2020

Tandem mass spectrometry: a novel approach for metabolic flux analysis

1 reference

12 December 2020

Enhanced glycoprotein production in HEK-293 cells expressing pyruvate carboxylase

1 reference

12 December 2020

A universal framework for 13C metabolic flux analysis

1 reference

12 December 2020

Identifiers

DOI

10.1186/1752-0509-6-43

1 reference

1 August 2017

DBLP publication ID

journals/bmcsb/CrownAA12

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

1 August 2017

1 reference