Single-cell analysis of population context advances RNAi screening at multiple levels (Q34244392)

31 July 2017

title

Single-cell analysis of population context advances RNAi screening at multiple levels (English)

1 reference

31 July 2017

Laura Burleigh

7

0 references

Berend Snijder

Berend Snijder

1

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Varpu Marjomäki

Varpu Marjomäki

19

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Mark Marsh

Mark Marsh

23

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Mario Schelhaas

17

Mario Schelhaas

1 reference

31 July 2017

Ali Amara

25

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Peter J M Rottier

21

Peter J M Rottier

1 reference

31 July 2017

22

Beate Sodeik

1 reference

31 July 2017

Giuseppe Balistreri

16

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Lucas Pelkmans

Lucas Pelkmans

28

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Cornelis A. M. de Haan

18

Cornelis A M De Haan

1 reference

31 July 2017

20

Timo Hyypiä

1 reference

31 July 2017

Jason Mercer

10

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Prisca Liberali

Prisca Liberali

4

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Urs F Greber

Urs Greber

26

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author name string

Raphael Sacher

2

1 reference

31 July 2017

Pauli Rämö

3

1 reference

31 July 2017

Karin Mench

5

1 reference

31 July 2017

Nina Wolfrum

6

1 reference

31 July 2017

Cameron C Scott

8

1 reference

31 July 2017

Monique H Verheije

9

1 reference

31 July 2017

Stefan Moese

11

1 reference

31 July 2017

Thomas Heger

12

1 reference

31 July 2017

Kristina Theusner

13

1 reference

31 July 2017

Andreas Jurgeit

14

1 reference

31 July 2017

David Lamparter

15

1 reference

31 July 2017

Jean Gruenberg

24

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31 July 2017

Ari Helenius

27

1 reference

31 July 2017

language of work or name

English

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publication date

24 April 2012

1 reference

Molecular Systems Biology

31 July 2017

published in

1 reference

31 July 2017

volume

8

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31 July 2017

issue

1

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page(s)

579

1 reference

Off-target effects dominate a large-scale RNAi screen for modulators of the TGF-β pathway and reveal microRNA regulation of TGFBR2

31 July 2017

cites work

1 reference

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Non-genetic heterogeneity from stochastic partitioning at cell division

6 July 2018

1 reference

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Functional roles for noise in genetic circuits

6 July 2018

1 reference

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Cell adhesion: integrating cytoskeletal dynamics and cellular tension

6 July 2018

1 reference

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Patterns of basal signaling heterogeneity can distinguish cellular populations with different drug sensitivities

6 July 2018

1 reference

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Functional genomic screen for modulators of ciliogenesis and cilium length

6 July 2018

1 reference

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Genomic screening with RNAi: results and challenges

6 July 2018

1 reference

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Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes

6 July 2018

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6 July 2018

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6 July 2018

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A genome-wide genetic screen for host factors required for hepatitis C virus propagation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Population context determines cell-to-cell variability in endocytosis and virus infection

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

What have RNAi screens taught us about viral-host interactions?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Host cell factors in HIV replication: meta-analysis of genome-wide studies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Single-molecule approaches to stochastic gene expression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Abl kinase inhibits the engulfment of apoptotic [corrected] cells in Caenorhabditis elegans

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Mechanisms of endocytosis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Differential function of Tie2 at cell-cell contacts and cell-substratum contacts regulated by angiopoietin-1

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Abl tyrosine kinases modulate cadherin-dependent adhesion upstream and downstream of Rho family GTPases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Simian Virus 40 depends on ER protein folding and quality control factors for entry into host cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Variability and memory of protein levels in human cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

CellProfiler: image analysis software for identifying and quantifying cell phenotypes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Systems biology of virus entry in mammalian cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Building mammalian signalling pathways with RNAi screens

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Growing roles for the mTOR pathway

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Noise in gene expression: origins, consequences, and control

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Regulated cell-to-cell variation in a cell-fate decision system

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

An endoribonuclease-prepared siRNA screen in human cells identifies genes essential for cell division

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

The gene-silencing efficiency of siRNA is strongly dependent on the local structure of mRNA at the targeted region

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Abl-dependent tyrosine phosphorylation of Sos-1 mediates growth-factor-induced Rac activation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Expression profiling reveals off-target gene regulation by RNAi

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

DAVID: Database for Annotation, Visualization, and Integrated Discovery

6 July 2018

1 reference

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6 July 2018

1 reference

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Stochastic gene expression in a single cell

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Regulation of noise in the expression of a single gene

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Intercellular junctions and cellular polarity: the PAR-aPKC complex, a conserved core cassette playing fundamental roles in cell polarity.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Caveolar endocytosis of simian virus 40 reveals a new two-step vesicular-transport pathway to the ER

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

EPS8 and E3B1 transduce signals from Ras to Rac

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

THINKING ABOUT BACTERIAL POPULATIONS AS MULTICELLULAR ORGANISMS

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Regulation of receptor-mediated endocytosis by Rho and Rac.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Cell adhesion: the molecular basis of tissue architecture and morphogenesis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

On the entry of Semliki forest virus into BHK-21 cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Cadherin cell adhesion receptors as a morphogenetic regulator

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3361004

Systems survey of endocytosis by multiparametric image analysis

6 July 2018

1 reference

High-throughput RNAi screening in cultured cells: a user's guide.

21 January 2018

1 reference

The Abelson tyrosine kinase, the Trio GEF and Enabled interact with the Netrin receptor Frazzled in Drosophila

21 January 2018

1 reference

Dosage-sensitive, reciprocal genetic interactions between the Abl tyrosine kinase and the putative GEF trio reveal trio's role in axon pathfinding

21 January 2018

1 reference

Encoding multiple unnatural amino acids via evolution of a quadruplet-decoding ribosome

21 January 2018

1 reference

Systems biology of virus infection in mammalian cells

21 January 2018

1 reference

Genome-wide analysis of human kinases in clathrin- and caveolae/raft-mediated endocytosis

21 January 2018

1 reference

Origins of regulated cell-to-cell variability

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22531119

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Correction: Abl Kinase Inhibits the Engulfment of Apopotic Cells in Caenorhabditis elegans.

1 reference

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/MSB.2012.9

1 reference

31 July 2017

1 reference

31 July 2017

1 reference