Phylogenetic incongruence among oncogenic genital alpha human papillomaviruses (Q34228533)

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9 January 2020

title

Phylogenetic incongruence among oncogenic genital alpha human papillomaviruses (English)

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9 January 2020

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2

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9 January 2020

4

Robert D Burk

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9 January 2020

author name string

Apurva Narechania

series ordinal

1

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9 January 2020

Rob DeSalle

series ordinal

3

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9 January 2020

language of work or name

English

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publication date

1 December 2005

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9 January 2020

number of pages

8

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based on heuristic

inferred from page(s)

published in

Journal of Virology

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9 January 2020

volume

79

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9 January 2020

issue

24

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9 January 2020

page(s)

15503-15510

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Overlapping reading frames in closely related human papillomaviruses result in modular rates of selection within E2.

9 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1316001

Mucosal human papillomaviruses encode four different E5 proteins whose chemistry and phylogeny correlate with malignant or benign growth

5 July 2018

1 reference

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Mechanisms of human papillomavirus-induced oncogenesis.

5 July 2018

1 reference

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Pathogenesis of human papillomaviruses in differentiating epithelia

5 July 2018

1 reference

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Classification of papillomaviruses

5 July 2018

1 reference

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Genome-scale approaches to resolving incongruence in molecular phylogenies

5 July 2018

1 reference

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Human papillomaviruses: targeting differentiating epithelial cells for malignant transformation

5 July 2018

1 reference

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Epidemiologic classification of human papillomavirus types associated with cervical cancer

5 July 2018

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The Bioperl toolkit: Perl modules for the life sciences

5 July 2018

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On combining protein sequences and nucleic acid sequences in phylogenetic analysis: the homeobox protein case

5 July 2018

1 reference

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MRBAYES: Bayesian inference of phylogenetic trees

5 July 2018

1 reference

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DNA archives and our nearest relative: the trichotomy problem revisited

5 July 2018

1 reference

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Flexible sequence similarity searching with the FASTA3 program package

5 July 2018

1 reference

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The evolution of small DNA viruses of eukaryotes: past and present considerations

5 July 2018

1 reference

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1316001

Analysis of genomic sequences of 95 papillomavirus types: uniting typing, phylogeny, and taxonomy

5 July 2018

1 reference

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Phylogenetic classification of human papillomaviruses: correlation with clinical manifestations

5 July 2018

1 reference

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The carcinogenicity of human papillomavirus types reflects viral evolution.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1316001

Distribution of human papillomavirus types 16 and 18 variants in squamous cell carcinomas and adenocarcinomas of the cervix

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1316001

A new method to localize and test the significance of incongruence: detecting domain shuffling in the nuclear receptor superfamily

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1316001

RDP: detection of recombination amongst aligned sequences

28 October 2018

1 reference

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Perils of paralogy: using HSP70 genes for inferring organismal phylogenies

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16306621

inferred from PubMed ID database lookup

12 December 2020

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The Widespread Colonization Island of Actinobacillus actinomycetemcomitans

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16306621

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12 December 2020

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Identifiers

DOI

10.1128/JVI.79.24.15503-15510.2005

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9 January 2020

1 reference

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9 January 2020

PubMed publication ID

16306621

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