Use of the gamma method for self-contained gene-set analysis of SNP data (Q34100207)

31 July 2017

title

Use of the gamma method for self-contained gene-set analysis of SNP data (English)

1 reference

single-nucleotide polymorphism

31 July 2017

main subject

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22166939

20 December 2024

fact database

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22166939

20 December 2024

5

Brooke L Fridley

1 reference

31 July 2017

Liewei Wang

3

1 reference

31 July 2017

Joanna M. Biernacka

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22166939

20 December 2024

Gregory D. Jenkins

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22166939

20 December 2024

Ann M. Moyer

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22166939

20 December 2024

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22166939

20 December 2024

publication date

14 December 2011

1 reference

full work available at URL

31 July 2017

https://www.nature.com/articles/ejhg2011236.pdf

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22166939

https://europepmc.org/articles/PMC3330217

20 December 2024

file format

HyperText Markup Language

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22166939

https://europepmc.org/articles/PMC3330217?pdf=render

20 December 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:22166939

http://www.nature.com/articles/ejhg2011236.pdf

20 December 2024

1 reference

10.1038/EJHG.2011.236

https://api.crossref.org/works/10.1038/EJHG.2011.236

http://www.nature.com/articles/ejhg2011236

20 December 2024

1 reference

DOI

10.1038/EJHG.2011.236

https://api.crossref.org/works/10.1038/EJHG.2011.236

European Journal of Human Genetics

20 December 2024

published in

1 reference

31 July 2017

volume

20

1 reference

31 July 2017

issue

5

1 reference

31 July 2017

page(s)

565-571

1 reference

Gene set analysis of SNP data: benefits, challenges, and future directions

31 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Analysing biological pathways in genome-wide association studies

5 July 2018

1 reference

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Radiation pharmacogenomics: a genome-wide association approach to identify radiation response biomarkers using human lymphoblastoid cell lines

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Self-Contained Gene-Set Analysis of Expression Data: An Evaluation of Existing and Novel Methods

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Insights into colon cancer etiology via a regularized approach to gene set analysis of GWAS data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Gene, region and pathway level analyses in whole-genome studies

5 July 2018

1 reference

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Gemcitabine and arabinosylcytosin pharmacogenomics: genome-wide association and drug response biomarkers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Gene ontology analysis of GWA study data sets provides insights into the biology of bipolar disorder

5 July 2018

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Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

5 July 2018

1 reference

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Pathway analysis by adaptive combination of P-values

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Integrated detection and population-genetic analysis of SNPs and copy number variation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Pathway-based approaches for analysis of genomewide association studies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Combining p-values in large-scale genomics experiments.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Improving gene set analysis of microarray data by SAM-GS.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Analyzing gene expression data in terms of gene sets: methodological issues

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Microarray data analysis: from disarray to consolidation and consensus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

A global test for groups of genes: testing association with a clinical outcome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3330217

Truncated product method for combining P-values.

5 July 2018

1 reference

https://api.crossref.org/works/10.1038/EJHG.2011.236

Testing association between disease and multiple SNPs in a candidate gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EJHG.2011.236

Combining probability from independent tests: the weighted Z-method is superior to Fisher's approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/EJHG.2011.236

21 January 2018

Identifiers

DOI

10.1038/EJHG.2011.236

1 reference

31 July 2017

1 reference

31 July 2017

1 reference