The chemical versatility of the beta-alpha-beta fold: catalytic promiscuity and divergent evolution in the tautomerase superfamily (Q34095040)

31 July 2017

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title

The chemical versatility of the beta-alpha-beta fold: catalytic promiscuity and divergent evolution in the tautomerase superfamily (English)

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31 July 2017

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G J Poelarends

1

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31 July 2017

V Puthan Veetil

series ordinal

2

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31 July 2017

C P Whitman

series ordinal

3

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31 July 2017

publication date

1 November 2008

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Cellular and Molecular Life Sciences

31 July 2017

published in

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31 July 2017

volume

65

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31 July 2017

issue

22

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31 July 2017

page(s)

3606-3618

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Kinetic and stereochemical analysis of YwhB, a 4-oxalocrotonate tautomerase homologue in Bacillus subtilis: mechanistic implications for the YwhB- and 4-oxalocrotonate tautomerase-catalyzed reactions

31 July 2017

cites work

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Phenylpyruvate tautomerase activity of trans-3-chloroacrylic acid dehalogenase: evidence for an enol intermediate in the dehalogenase reaction?

5 July 2018

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Evolution of enzymatic activity in the tautomerase superfamily: mechanistic and structural consequences of the L8R mutation in 4-oxalocrotonate tautomerase

5 July 2018

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Designed divergent evolution of enzyme function

5 July 2018

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Inactivation of malonate semialdehyde decarboxylase by 3-halopropiolates: evidence for hydratase activity

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Evolution of enzymatic activity in the tautomerase superfamily: mechanistic and structural studies of the 1,3-dichloropropene catabolic enzymes

5 July 2018

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Cloning, expression, and characterization of a cis-3-chloroacrylic acid dehalogenase: insights into the mechanistic, structural, and evolutionary relationship between isomer-specific 3-chloroacrylic acid dehalogenases

5 July 2018

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The X-ray structure of trans-3-chloroacrylic acid dehalogenase reveals a novel hydration mechanism in the tautomerase superfamily

5 July 2018

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The 4-oxalocrotonate tautomerase- and YwhB-catalyzed hydration of 3E-haloacrylates: implications for the evolution of new enzymatic activities

5 July 2018

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Reactions of trans-3-chloroacrylic acid dehalogenase with acetylene substrates: consequences of and evidence for a hydration reaction

5 July 2018

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Enzymes with extra talents: moonlighting functions and catalytic promiscuity

5 July 2018

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Evolution of function in (β/α)8-barrel enzymes

5 July 2018

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The crystal structure of YdcE, a 4-oxalocrotonate tautomerase homologue from Escherichia coli, confirms the structural basis for oligomer diversity

5 July 2018

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The 4-oxalocrotonate tautomerase family of enzymes: how nature makes new enzymes using a beta-alpha-beta structural motif

5 July 2018

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trans-3-Chloroacrylic acid dehalogenase from Pseudomonas pavonaceae 170 shares structural and mechanistic similarities with 4-oxalocrotonate tautomerase

5 July 2018

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Functional interrelationships in the alkaline phosphatase superfamily: phosphodiesterase activity of Escherichia coli alkaline phosphatase

5 July 2018

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The crotonase superfamily: divergently related enzymes that catalyze different reactions involving acyl coenzyme a thioesters

5 July 2018

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New functions from old scaffolds: how nature reengineers enzymes for new functions

5 July 2018

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Pro-1 of macrophage migration inhibitory factor functions as a catalytic base in the phenylpyruvate tautomerase activity

5 July 2018

1 reference

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Catalytic promiscuity and the evolution of new enzymatic activities

5 July 2018

1 reference

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Crystal structure of 4-oxalocrotonate tautomerase inactivated by 2-oxo-3-pentynoate at 2.4 A resolution: analysis and implications for the mechanism of inactivation and catalysis

5 July 2018

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Degradation of 1,3-dichloropropene by pseudomonas cichorii 170.

5 July 2018

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Inactivation of 4-Oxalocrotonate Tautomerase by 2-Oxo-3-pentynoate

5 July 2018

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The macrophage migration inhibitory factor MIF is a phenylpyruvate tautomerase

5 July 2018

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Understanding enzyme superfamilies. Chemistry As the fundamental determinant in the evolution of new catalytic activities

5 July 2018

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Evolutionary Divergence of Substrate Specificity within the Chymotrypsin-like Serine Protease Fold

5 July 2018

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Structural classification of proteins: new superfamilies

5 July 2018

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Crystal structure at 2.6-A resolution of human macrophage migration inhibitory factor

5 July 2018

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Crystal structure of the macrophage migration inhibitory factor from rat liver

5 July 2018

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Catalytic role of the amino-terminal proline in 4-oxalocrotonate tautomerase: affinity labeling and heteronuclear NMR studies

5 July 2018

1 reference

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Enzymatic ketonization of 2-hydroxymuconate: specificity and mechanism investigated by the crystal structures of two isomerases

5 July 2018

1 reference

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Transposon mutagenesis analysis of meta-cleavage pathway operon genes of the TOL plasmid of Pseudomonas putida mt-2

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

Molecular cloning, expression, and analysis of the genes of the homoprotocatechuate catabolic pathway of Escherichia coli C.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

Physically associated enzymes produce and metabolize 2-hydroxy-2,4-dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putida

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

Bacterial metabolism of 3-chloroacrylic acid

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

4-Oxalocrotonate tautomerase, an enzyme composed of 62 amino acid residues per monomer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

Enzyme recruitment in evolution of new function

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

Characterization of Cg10062 from Corynebacterium glutamicum: implications for the evolution of cis-3-chloroacrylic acid dehalogenase activity in the tautomerase superfamily

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

Crystal structures of the wild-type, P1A mutant, and inactivated malonate semialdehyde decarboxylase: a structural basis for the decarboxylase and hydratase activities

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

Shared promiscuous activities and evolutionary features in various members of the amidohydrolase superfamily.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

Stereospecific alkylation of cis-3-chloroacrylic acid dehalogenase by (R)-oxirane-2-carboxylate: analysis and mechanistic implications

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

The roles of active-site residues in the catalytic mechanism of trans-3-chloroacrylic acid dehalogenase: a kinetic, NMR, and mutational analysis

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

Mechanistic characterization of a bacterial malonate semialdehyde decarboxylase: identification of a new activity on the tautomerase superfamily

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

The evolution of functionally novel proteins after gene duplication.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930816

Bacterial degradation of 3-chloroacrylic acid and the characterization of cis- and trans-specific dehalogenases

28 October 2018

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12 December 2020

Crystal structures of native and inactivated cis-3-chloroacrylic acid dehalogenase. Structural basis for substrate specificity and inactivation by (R)-oxirane-2-carboxylate

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12 December 2020

4-Oxalocrotonate tautomerase: pH dependence of catalysis and pKa values of active site residues

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12 December 2020

Mandelate racemase and muconate lactonizing enzyme are mechanistically distinct and structurally homologous

1 reference

12 December 2020

10.1007/S00018-008-8285-X

Identifiers

DOI

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31 July 2017

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31 July 2017

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