Compositional bias in DNA. (Q34087823)

30 July 2017

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title

Compositional bias in DNA. (English)

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30 July 2017

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Gautier C

1

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30 July 2017

publication date

1 December 2000

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Current Opinion in Genetics & Development

30 July 2017

published in

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30 July 2017

volume

10

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30 July 2017

issue

6

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30 July 2017

page(s)

656-661

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Relationships between genomic G C content, RNA secondary structures, and optimal growth temperature in prokaryotes

30 July 2017

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The unusual mutagenic specificity of an E. Coli mutator gene

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7 January 2021

Codon base randomness and composition drift in coliphage

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7 January 2021

Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting tran

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7 January 2021

Codon usage in bacteria: correlation with gene expressivity

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7 January 2021

Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: gene expression level and species-specific diversity of codon usage based on multivariate analysis

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7 January 2021

Codon usage and gene function are related in sequences of Arabidopsis thaliana

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7 January 2021

Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila, and Arabidopsis.

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7 January 2021

tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes

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7 January 2021

Two aspects of DNA base composition: G C content and translation-coupled deviation from intra-strand rule of A = T and G = C.

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7 January 2021

Codon usage and genome evolution.

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7 January 2021

Translational selection and molecular evolution

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Coding sequence evolution

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7 January 2021

The genome sequence of the plant pathogen Xylella fastidiosa. The Xylella fastidiosa Consortium of the Organization for Nucleotide Sequencing and Analysis

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7 January 2021

Oriloc: prediction of replication boundaries in unannotated bacterial chromosomes

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7 January 2021

Analyzing genomes with cumulative skew diagrams

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Strand asymmetries in DNA evolution

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

When polymerases collide: replication and the transcriptional organization of the E. coli chromosome

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Intrastrand parity rules of DNA base composition and usage biases of synonymous codons.

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Properties of a general model of DNA evolution under no-strand-bias conditions.

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7 January 2021

Asymmetric substitution patterns in the two DNA strands of bacteria

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7 January 2021

Evolution of DNA base composition under no-strand-bias conditions when the substitution rates are not constant.

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Asymmetrical directional mutation pressure in the mitochondrial genome of mammals.

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Proteome composition and codon usage in spirochaetes: species-specific and DNA strand-specific mutational biases

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

The contributions of replication orientation, gene direction, and signal sequences to base-composition asymmetries in bacterial genomes

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Hydrophobicity, expressivity and aromaticity are the major trends of amino-acid usage in 999 Escherichia coli chromosome-encoded genes

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Influence of genomic G C content on average amino-acid composition of proteins from 59 bacterial species

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Base composition skews, replication orientation, and gene orientation in 12 prokaryote genomes

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Replicational and transcriptional selection on codon usage in Borrelia burgdorferi

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Universal replication biases in bacteria

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Functional polarization of the Escherichia coli chromosome terminus: the dif site acts in chromosome dimer resolution only when located between long stretches of opposite polarity

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

An analysis of eukaryotic genomes by density gradient centrifugation

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Isochores and the evolutionary genomics of vertebrates

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Diversity in G C content at the third position of codons in vertebrate genes and its cause

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Correlations between the compositional properties of human genes, codon usage, and amino acid composition of proteins

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Human coding and noncoding DNA: compositional correlations

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

The gene distribution of the human genome

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

The distribution of genes in the human genome

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

The distribution of interspersed repeats is nonuniform and conserved in the mouse and human genomes.

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

The isopycnic, compartmentalized integration of Rous sarcoma virus sequences

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Regional specificity of HTLV-I proviral integration in the human genome

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

CpG doublets, CpG islands and Alu repeats in long human DNA sequences from different isochore families.

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Global variation in G C content along vertebrate genome DNA. Possible correlation with chromosome band structures

1 reference

https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Evident diversity of codon usage patterns of human genes with respect to chromosome banding patterns and chromosome numbers; relation between nucleotide sequence data and cytogenetic data

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Compositional properties of telomeric regions from human chromosomes

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Correlations between isochores and chromosomal bands in the human genome.

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Identification of the gene-richest bands in human chromosomes

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Recombination and mammalian genome evolution

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

The DNA sequence of human chromosome 21

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

The DNA sequence of human chromosome 22

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

A boundary of long-range G C% mosaic domains in the human MHC locus: pseudoautosomal boundary-like sequence exists near the boundary

1 reference

https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Complete sequence and gene map of a human major histocompatibility complex. The MHC sequencing consortium

1 reference

https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Gene organisation, sequence variation and isochore structure at the centromeric boundary of the human MHC.

1 reference

https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

The isochore organization and the compositional distribution of homologous coding sequences in the nuclear genome of plants

1 reference

https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Compositional patterns in the nuclear genome of cold-blooded vertebrates

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Evolution of genome size and DNA base composition in reptiles

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Warm-blooded isochore structure in Nile crocodile and turtle

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

The compositional distribution of coding sequences and DNA molecules in humans and murids

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Codon usage changes and sequence dissimilarity between human and rat

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Evidence for higher rates of nucleotide substitution in rodents than in man

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Mutation rates differ among regions of the mammalian genome

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Chromosomal location effects on gene sequence evolution in mammals

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Isochores result from mutation not selection

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Mutation pattern variation among regions of the primate genome

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

Precise switching of DNA replication timing in the GC content transition area in the human major histocompatibility complex.

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

The evolution of base composition and phylogenetic inference

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https://api.crossref.org/works/10.1016/S0959-437X(00)00144-1

7 January 2021

10.1016/S0959-437X(00)00144-1

Identifiers

DOI

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30 July 2017

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