Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets (Q34044099)

30 July 2017

title

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets (English)

1 reference

single cell transcriptomics

30 July 2017

main subject

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A curated database reveals trends in single-cell transcriptomics

7 February 2021

15

Aviv Regev

1 reference

30 July 2017

3

Rahul Satija

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Itay Tirosh

7

object named as

Itay Tirosh

1 reference

30 July 2017

Alex K Shalek

14

0 references

Joshua R. Sanes

13

object named as

Joshua R Sanes

1 reference

30 July 2017

1

Evan Z Macosko

1 reference

30 July 2017

2

Anindita Basu

1 reference

30 July 2017

11

John J Trombetta

1 reference

30 July 2017

5

Karthik Shekhar

1 reference

30 July 2017

James Nemesh

4

1 reference

30 July 2017

Melissa Goldman

6

1 reference

30 July 2017

Allison R Bialas

8

1 reference

30 July 2017

Nolan Kamitaki

9

1 reference

30 July 2017

Emily M Martersteck

10

1 reference

30 July 2017

David A Weitz

12

1 reference

30 July 2017

Steven A McCarroll

16

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30 July 2017

language of work or name

English

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publication date

1 May 2015

1 reference

external data available at URL

30 July 2017

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE63473

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

1 reference

30 July 2017

volume

161

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30 July 2017

issue

5

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30 July 2017

page(s)

1202-1214

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describes a project that uses

30 July 2017

eye

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

Drop-seq

1 reference

A curated database reveals trends in single-cell transcriptomics

The types of retinal ganglion cells: current status and implications for neuronal classification

7 February 2021

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Spatial reconstruction of single-cell gene expression data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Statistical significance of variables driving systematic variation in high-dimensional data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Mapping the stereotyped behaviour of freely moving fruit flies.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Single-cell RNA-seq reveals dynamic paracrine control of cellular variation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Tbr2 is required to generate a neural circuit mediating the pupillary light reflex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Quantitative single-cell RNA-seq with unique molecular identifiers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Automatic Classification of Cellular Expression by Nonlinear Stochastic Embedding (ACCENSE).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Accounting for technical noise in single-cell RNA-seq experiments.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Smart-seq2 for sensitive full-length transcriptome profiling in single cells.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Data exploration, quality control and testing in single-cell qPCR-based gene expression experiments.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

The neuronal organization of the retina

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

CEL-Seq: single-cell RNA-Seq by multiplexed linear amplification

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Transcriptional code and disease map for adult retinal cell types.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Counting absolute numbers of molecules using unique molecular identifiers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

High-throughput droplet digital PCR system for absolute quantitation of DNA copy number

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Neurod6 expression defines new retinal amacrine cell subtypes and regulates their fate

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Design principles of insect and vertebrate visual systems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

mRNA-Seq whole-transcriptome analysis of a single cell

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Genetic dissection of neural circuits

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

On-chip single-copy real-time reverse-transcription PCR in isolated picoliter droplets

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Tissue-specific regulation of the mouse alphaA-crystallin gene in lens via recruitment of Pax6 and c-Maf to its promoter

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Gelatinase B/matrix metalloproteinase-9 provokes cataract by cleaving lens betaB1 crystallin.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Identification of genes periodically expressed in the human cell cycle and their expression in tumors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Reverse transcriptase template switching: a SMART approach for full-length cDNA library construction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

The major cell populations of the mouse retina.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Kinetics of renaturation of DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Repeated sequences in DNA. Hundreds of thousands of copies of DNA sequences have been incorporated into the genomes of higher organisms

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Development of excitatory and inhibitory neurotransmitters in transitory cholinergic neurons, starburst amacrine cells, and GABAergic amacrine cells of rabbit retina, with implications for previsual and visual development of retinal ganglion cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Dripping to jetting transitions in coflowing liquid streams

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Characterization of an amacrine cell type of the mammalian retina immunoreactive for vesicular glutamate transporter 3.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Expression of neuronal connexin36 in AII amacrine cells of the mammalian retina.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Dynamic Pattern Formation in a Vesicle-Generating Microfluidic Device

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481139

Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.

28 October 2018

2 references

24 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2015.05.002

24 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1016/J.CELL.2015.04.044

Identifiers

DOI

10.1016/J.CELL.2015.05.002

1 reference

30 July 2017

1 reference

30 July 2017

1 reference