A comprehensive map of mobile element insertion polymorphisms in humans (Q34005332)

30 July 2017

title

A comprehensive map of mobile element insertion polymorphisms in humans (English)

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30 July 2017

Deniz Kural

2

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Jan Korbel

object named as

Jan O Korbel

19

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Mark Batzer

18

object named as

Mark A Batzer

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30 July 2017

17

Lynn B Jorde

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30 July 2017

1

Chip Stewart

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30 July 2017

Michael P Strömberg

3

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30 July 2017

Jerilyn A Walker

4

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30 July 2017

Miriam K Konkel

5

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30 July 2017

Adrian M Stütz

6

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30 July 2017

Alexander E Urban

7

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30 July 2017

Fabian Grubert

8

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30 July 2017

Hugo Y K Lam

9

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30 July 2017

Wan-Ping Lee

10

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30 July 2017

Michele Busby

11

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30 July 2017

Amit R Indap

12

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30 July 2017

Erik Garrison

13

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30 July 2017

Chad Huff

14

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30 July 2017

Jinchuan Xing

15

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30 July 2017

Michael P Snyder

16

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30 July 2017

Gabor T Marth

20

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30 July 2017

1000 Genomes Project

21

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30 July 2017

publication date

18 August 2011

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30 July 2017

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30 July 2017

volume

7

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30 July 2017

issue

8

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30 July 2017

page(s)

e1002236

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Creative Commons Attribution 4.0 International

30 July 2017

copyright license

start time

18 August 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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5 July 2018

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5 July 2018

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Whole-genome resequencing allows detection of many rare LINE-1 insertion alleles in humans

5 July 2018

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5 July 2018

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Mobile interspersed repeats are major structural variants in the human genome

5 July 2018

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LINE-1 retrotransposition activity in human genomes

5 July 2018

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5 July 2018

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High-throughput sequencing reveals extensive variation in human-specific L1 content in individual human genomes

5 July 2018

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Towards a comprehensive structural variation map of an individual human genome

5 July 2018

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5 July 2018

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Complete Khoisan and Bantu genomes from southern Africa

5 July 2018

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The UCSC Genome Browser database: update 2010

5 July 2018

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LINE dancing in the human genome: transposable elements and disease

5 July 2018

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5 July 2018

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The impact of retrotransposons on human genome evolution

5 July 2018

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5 July 2018

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L1 retrotransposition in human neural progenitor cells

5 July 2018

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Sensitive and accurate detection of copy number variants using read depth of coverage

5 July 2018

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Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads

5 July 2018

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Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes

5 July 2018

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Mobile elements create structural variation: analysis of a complete human genome.

5 July 2018

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Fine-scaled human genetic structure revealed by SNP microarrays

5 July 2018

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The regulated retrotransposon transcriptome of mammalian cells

5 July 2018

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L1 recombination-associated deletions generate human genomic variation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Accurate whole human genome sequencing using reversible terminator chemistry

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Mapping short DNA sequencing reads and calling variants using mapping quality scores

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Estimation of hominoid ancestral population sizes under bayesian coalescent models incorporating mutation rate variation and sequencing errors

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Mapping and sequencing of structural variation from eight human genomes

5 July 2018

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Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering

5 July 2018

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Paired-end mapping reveals extensive structural variation in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

The diploid genome sequence of an individual human

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Which transposable elements are active in the human genome?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Progress in understanding the biology of the human mutagen LINE-1.

5 July 2018

1 reference

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Evolutionary history of 7SL RNA-derived SINEs in Supraprimates

5 July 2018

1 reference

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Global variation in copy number in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Identification and characterization of novel polymorphic LINE-1 insertions through comparison of two human genome sequence assemblies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

An initial map of insertion and deletion (INDEL) variation in the human genome.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Human genomic deletions mediated by recombination between Alu elements.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Recently mobilized transposons in the human and chimpanzee genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

dbRIP: a highly integrated database of retrotransposon insertion polymorphisms in humans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Calibrating a coalescent simulation of human genome sequence variation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Initial sequence of the chimpanzee genome and comparison with the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Repbase Update, a database of eukaryotic repetitive elements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

The allele frequency spectrum in genome-wide human variation data reveals signals of differential demographic history in three large world populations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

SVA elements are nonautonomous retrotransposons that cause disease in humans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

LINE-mediated retrotransposition of marked Alu sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Hot L1s account for the bulk of retrotransposition in the human population

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Estimating ancestral population sizes and divergence times

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Alu repeats and human genomic diversity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

BLAT—The BLAST-Like Alignment Tool

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Automated finishing with autofinish

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Genomic divergences between humans and other hominoids and the effective population size of the common ancestor of humans and chimpanzees

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Estimate of the mutation rate per nucleotide in humans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Recent common ancestry of human Y chromosomes: evidence from DNA sequence data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

High frequency retrotransposition in cultured mammalian cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Mutation analysis in the BRCA2 gene in primary breast cancers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Statistical properties of segregating sites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Evolutionary Rate at the Molecular Level

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Haemophilia A resulting from de novo insertion of L1 sequences represents a novel mechanism for mutation in man.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Master genes in mammalian repetitive DNA amplification

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

On the number of segregating sites in genetical models without recombination

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3158055

Retrotransposition of Alu elements: how many sources?

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002236

SVA elements: a hominid-specific retroposon family

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002236

Estimating the retrotransposition rate of human Alu elements

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1002236

10.1371/JOURNAL.PGEN.1002236

21 January 2018

Identifiers

DOI

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30 July 2017

1 reference

30 July 2017

1 reference