A C-terminal region of RAG1 contacts the coding DNA during V(D)J recombination. (Q33967550)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11238939 AND SRC:MED&resulttype=core&format=json

5 November 2019

title

A C-terminal region of RAG1 contacts the coding DNA during V(D)J recombination (English)

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5 November 2019

3

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5 November 2019

author name string

X Mo

series ordinal

1

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5 November 2019

T Bailin

series ordinal

2

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5 November 2019

language of work or name

English

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publication date

1 March 2001

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Molecular and Cellular Biology

5 November 2019

published in

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5 November 2019

volume

21

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5 November 2019

issue

6

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5 November 2019

page(s)

2038-2047

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Three-dimensional structure of the Tn5 synaptic complex transposition intermediate

5 November 2019

cites work

1 reference

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Postcleavage sequence specificity in V(D)J recombination

5 July 2018

1 reference

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The RAG proteins and V(D)J recombination: complexes, ends, and transposition

5 July 2018

1 reference

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A highly ordered structure in V(D)J recombination cleavage complexes is facilitated by HMG1.

5 July 2018

1 reference

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Mutations of acidic residues in RAG1 define the active site of the V(D)J recombinase

5 July 2018

1 reference

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Mutational analysis of RAG1 and RAG2 identifies three catalytic amino acids in RAG1 critical for both cleavage steps of V(D)J recombination

5 July 2018

1 reference

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Mechanistic basis for coding end sequence effects in the initiation of V(D)J recombination

5 July 2018

1 reference

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The RAG1 homeodomain recruits HMG1 and HMG2 to facilitate recombination signal sequence binding and to enhance the intrinsic DNA-bending activity of RAG1-RAG2

5 July 2018

1 reference

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Signal joint formation is inhibited in murine scid preB cells and fibroblasts in substrates with homopolymeric coding ends.

5 July 2018

1 reference

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A RAG1 and RAG2 tetramer complex is active in cleavage in V(D)J recombination

5 July 2018

1 reference

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DNA hairpin opening mediated by the RAG1 and RAG2 proteins

5 July 2018

1 reference

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Detection of RAG protein-V(D)J recombination signal interactions near the site of DNA cleavage by UV cross-linking

5 July 2018

1 reference

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RAG-2 promotes heptamer occupancy by RAG-1 in the assembly of a V(D)J initiation complex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

RAG1 and RAG2 cooperate in specific binding to the recombination signal sequence in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

Hairpin coding end opening is mediated by RAG1 and RAG2 proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

The RAG-HMG1 complex enforces the 12/23 rule of V(D)J recombination specifically at the double-hairpin formation step

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

V(D)J recombination signal recognition: distinct, overlapping DNA-protein contacts in complexes containing RAG1 with and without RAG2.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

Functional analysis of coordinated cleavage in V(D)J recombination

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

Distinct roles of RAG1 and RAG2 in binding the V(D)J recombination signal sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

Spatial organization of transcription elongation complex in Escherichia coli

5 July 2018

1 reference

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Assembly of a 12/23 paired signal complex: a critical control point in V(D)J recombination

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

The composition of coding joints formed in V(D)J recombination is strongly affected by the nucleotide sequence of the coding ends and their relationship to the recombination signal sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

Nucleotide deletion and P addition in V(D)J recombination: a determinant role of the coding-end sequence

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

Stimulation of V(D)J cleavage by high mobility group proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

V(D)J recombination: modulation of RAG1 and RAG2 cleavage activity on 12/23 substrates by whole cell extract and DNA-bending proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

Recent advances in understanding V(D)J recombination.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

RAG1 and RAG2 form a stable postcleavage synaptic complex with DNA containing signal ends in V(D)J recombination

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

DNA sequence and structure requirements for cleavage of V(D)J recombination signal sequences

5 July 2018

1 reference

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Distinct DNA sequence and structure requirements for the two steps of V(D)J recombination signal cleavage

5 July 2018

1 reference

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The RAG1 and RAG2 proteins establish the 12/23 rule in V(D)J recombination

5 July 2018

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Initiation of V(D)J recombination in vitro obeying the 12/23 rule

5 July 2018

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Mechanistic constraints on diversity in human V(D)J recombination

5 July 2018

1 reference

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Coding end sequence can markedly affect the initiation of V(D)J recombination

5 July 2018

1 reference

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Expression and V(D)J recombination activity of mutated RAG-1 proteins

5 July 2018

1 reference

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The mechanism of V(D)J joining: lessons from molecular, immunological, and comparative analyses

5 July 2018

1 reference

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Initiation of V(D)J recombination in a cell-free system.

5 July 2018

1 reference

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Photocrosslinking of 5-Iodouracil-Substituted RNA and DNA to Proteins

5 July 2018

1 reference

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Somatic generation of antibody diversity

5 July 2018

1 reference

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The V(D)J recombination activating gene, RAG-1.

5 July 2018

1 reference

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RAG-1 and RAG-2, adjacent genes that synergistically activate V(D)J recombination

5 July 2018

1 reference

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Cutting and closing without recombination in V(D)J joining

5 July 2018

1 reference

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Mapping the active site of ribonuclease P RNA using a substrate containing a photoaffinity agent.

5 July 2018

1 reference

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The homeodomain region of Rag-1 reveals the parallel mechanisms of bacterial and V(D)J recombination

5 July 2018

1 reference

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Cleavage at a V(D)J recombination signal requires only RAG1 and RAG2 proteins and occurs in two steps

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

RAG-1 mutations that affect the target specificity of V(D)j recombination: a possible direct role of RAG-1 in site recognition.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86807

Mapping protease susceptibility sites on the Escherichia coli transcription factor sigma70

29 October 2018

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12 December 2020

Cell-free V(D)J recombination

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12 December 2020

Novel strand exchanges in V(D)J recombination

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12 December 2020

Studies of the functional topography of Escherichia coli RNA polymerase. A method for localization of the sites of affinity labelling

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12 December 2020

10.1128/MCB.21.6.2038-2047.2001

Identifiers

DOI

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11238939 AND SRC:MED&resulttype=core&format=json

5 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11238939 AND SRC:MED&resulttype=core&format=json

5 November 2019

PubMed publication ID

11238939

1 reference