Programming and inheritance of parental DNA methylomes in mammals (Q33894408)

29 July 2017

title

Programming and inheritance of parental DNA methylomes in mammals (English)

1 reference

29 July 2017

Guoqiang Li

9

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Weimin Ci

object named as

Weimin Ci

10

0 references

Jing Zhang

object named as

Jing Zhang

8

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author name string

Lu Wang

1

1 reference

29 July 2017

Jun Zhang

2

1 reference

29 July 2017

Jialei Duan

3

1 reference

29 July 2017

Xinxing Gao

4

1 reference

29 July 2017

Wei Zhu

5

1 reference

29 July 2017

Xingyu Lu

6

1 reference

29 July 2017

Lu Yang

7

1 reference

29 July 2017

Wei Li

11

1 reference

29 July 2017

Qi Zhou

12

1 reference

29 July 2017

Neel Aluru

13

1 reference

29 July 2017

Fuchou Tang

14

1 reference

29 July 2017

Chuan He

15

1 reference

29 July 2017

Xingxu Huang

16

1 reference

29 July 2017

Jiang Liu

17

1 reference

29 July 2017

language of work or name

English

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publication date

1 May 2014

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29 July 2017

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29 July 2017

volume

157

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29 July 2017

issue

4

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29 July 2017

page(s)

979-991

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Reversing DNA methylation: mechanisms, genomics, and biological functions

29 July 2017

cites work

1 reference

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Epigenetic memory at embryonic enhancers identified in DNA methylation maps from adult mouse tissues

5 July 2018

1 reference

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Charting a dynamic DNA methylation landscape of the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Global epigenomic reconfiguration during mammalian brain development

5 July 2018

1 reference

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Epigenomic analysis of multilineage differentiation of human embryonic stem cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Sperm, but not oocyte, DNA methylome is inherited by zebrafish early embryos

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Reprogramming the maternal zebrafish genome after fertilization to match the paternal methylation pattern

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Genome-wide profiling of 5-formylcytosine reveals its roles in epigenetic priming

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Conceptual links between DNA methylation reprogramming in the early embryo and primordial germ cells

5 July 2018

1 reference

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Metabolism throughout follicle and oocyte development in mammals.

5 July 2018

1 reference

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Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

The dynamics of genome-wide DNA methylation reprogramming in mouse primordial germ cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

A map of the cis-regulatory sequences in the mouse genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

PGC7 binds histone H3K9me2 to protect against conversion of 5mC to 5hmC in early embryos

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

A unique regulatory phase of DNA methylation in the early mammalian embryo

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation in the mouse genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Thymine DNA glycosylase specifically recognizes 5-carboxylcytosine-modified DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Generation and replication-dependent dilution of 5fC and 5caC during mouse preimplantation development.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Replication-Dependent Loss of 5-Hydroxymethylcytosine in Mouse Preimplantation Embryos

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Conservation and divergence of methylation patterning in plants and animals

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Genome-wide evolutionary analysis of eukaryotic DNA methylation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

A tripartite paternally methylated region within the Gpr1-Zdbf2 imprinted domain on mouse chromosome 1 identified by meDIP-on-chip

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Human DNA methylomes at base resolution show widespread epigenomic differences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

BSMAP: whole genome bisulfite sequence MAPping program

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

PGC7/Stella protects against DNA demethylation in early embryogenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Genomic imprinting: parental influence on the genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Epigenetic inheritance at the agouti locus in the mouse

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

A cluster of oppositely imprinted transcripts at the Gnas locus in the distal imprinting region of mouse chromosome 2

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Parental imprinting and human disease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Genetic conflict and evolution of mammalian X-chromosome inactivation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Beyond DNA: programming and inheritance of parental methylomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Cytosine-5-methyltransferases add aldehydes to DNA.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Identification of imprinted loci by methylation-sensitive representational difference analysis: application to mouse distal chromosome 2.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

The conflict theory of genomic imprinting: how much can be explained?

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Mouse mutants lacking the type 2 IGF receptor (IGF2R) are rescued from perinatal lethality in Igf2 and Igf1r null backgrounds

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Identification of Grf1 on mouse chromosome 9 as an imprinted gene by RLGS-M.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Identification of an imprinted U2af binding protein related sequence on mouse chromosome 11 using the RLGS method

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4096154

Constitutive genomic methylation during embryonic development of Xenopus

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24813617

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genome imprinting and development in the mouse

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24813617

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics

1 reference

20 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1093/NAR/GKS540

Identifiers

DOI

10.1016/J.CELL.2014.04.017

1 reference

29 July 2017

1 reference

29 July 2017

1 reference