Sequence specificity of viral end DNA binding by HIV-1 integrase reveals critical regions for protein-DNA interaction (Q33889660)

29 July 2017

title

Sequence specificity of viral end DNA binding by HIV-1 integrase reveals critical regions for protein-DNA interaction (English)

1 reference

29 July 2017

Esposito D

1

1 reference

29 July 2017

Craigie R

series ordinal

2

1 reference

29 July 2017

language of work or name

English

0 references

publication date

1 October 1998

1 reference

29 July 2017

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29 July 2017

volume

17

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29 July 2017

issue

19

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29 July 2017

page(s)

5832-5843

1 reference

Three new structures of the core domain of HIV-1 integrase: an active site that binds magnesium

29 July 2017

cites work

1 reference

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Effects of mutations in residues near the active site of human immunodeficiency virus type 1 integrase on specific enzyme-substrate interactions

5 July 2018

1 reference

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Mutational scan of the human immunodeficiency virus type 2 integrase protein

5 July 2018

1 reference

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Mapping Viral DNA Specificity to the Central Region of Integrase by Using Functional Human Immunodeficiency Virus Type 1/Visna Virus Chimeric Proteins

5 July 2018

1 reference

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Critical contacts between HIV-1 integrase and viral DNA identified by structure-based analysis and photo-crosslinking

5 July 2018

1 reference

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Solution structure of the N-terminal zinc binding domain of HIV-1 integrase

5 July 2018

1 reference

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Factors responsible for target site selection in Tn10 transposition: a role for the DDE motif in target DNA capture.

5 July 2018

1 reference

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Characterization of feline immunodeficiency virus integrase and analysis of functional domains

5 July 2018

1 reference

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A stable RAG1-RAG2-DNA complex that is active in V(D)J cleavage

5 July 2018

1 reference

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Functional identification of nucleotides conferring substrate specificity to retroviral integrase reactions

5 July 2018

1 reference

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The catalytic domain of human immunodeficiency virus integrase: ordered active site in the F185H mutant

5 July 2018

1 reference

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Influence of subterminal viral DNA nucleotides on differential susceptibility to cleavage by human immunodeficiency virus type 1 and visna virus integrases.

5 July 2018

1 reference

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Zinc folds the N-terminal domain of HIV-1 integrase, promotes multimerization, and enhances catalytic activity

5 July 2018

1 reference

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Retroviral integrases and their cousins

5 July 2018

1 reference

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Nonspecific alcoholysis, a novel endonuclease activity of human immunodeficiency virus type 1 and other retroviral integrases

5 July 2018

1 reference

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The RAG1 and RAG2 proteins establish the 12/23 rule in V(D)J recombination

5 July 2018

1 reference

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Characterization of the DNA-binding activity of HIV-1 integrase using a filter binding assay

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Identification of the catalytic and DNA-binding region of the human immunodeficiency virus type I integrase protein

5 July 2018

1 reference

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Mutational analysis of the sequences at the termini of the Moloney murine leukemia virus DNA required for integration

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Characterization of a DNA binding domain in the C-terminus of HIV-1 integrase by deletion mutagenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Identification of discrete functional domains of HIV-1 integrase and their organization within an active multimeric complex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

The human immunodeficiency virus integrase protein

5 July 2018

1 reference

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The core and carboxyl-terminal domains of the integrase protein of human immunodeficiency virus type 1 each contribute to nonspecific DNA binding.

5 July 2018

1 reference

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A stable complex between integrase and viral DNA ends mediates human immunodeficiency virus integration in vitro

5 July 2018

1 reference

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DNA substrate requirements for different activities of the human immunodeficiency virus type 1 integrase protein.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Formation of a stable complex between the human immunodeficiency virus integrase protein and viral DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Crystal structure of the catalytic domain of HIV-1 integrase: similarity to other polynucleotidyl transferases

5 July 2018

1 reference

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An RNA-protein contact determined by 5-bromouridine substitution, photocrosslinking and sequencing

5 July 2018

1 reference

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Bacterial transposases and retroviral integrases.

5 July 2018

1 reference

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Recombining the structures of HIV integrase, RuvC and RNase H.

5 July 2018

1 reference

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Different roles of bases within the integration signal sequence of human immunodeficiency virus type 1 in vitro.

5 July 2018

1 reference

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Photocrosslinking of 5-Iodouracil-Substituted RNA and DNA to Proteins

5 July 2018

1 reference

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Efficient magnesium-dependent human immunodeficiency virus type 1 integrase activity

5 July 2018

1 reference

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Sequences in the human immunodeficiency virus type 1 U3 region required for in vivo and in vitro integration

5 July 2018

1 reference

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Solution structure of the DNA binding domain of HIV-1 integrase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

The phage Mu transpososome core: DNA requirements for assembly and function

5 July 2018

1 reference

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The DNA-binding domain of HIV-1 integrase has an SH3-like fold

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

5 July 2018

The retroviral enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

The avian retroviral integration protein cleaves the terminal sequences of linear viral DNA at the in vivo sites of integration

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Human immunodeficiency virus integration protein expressed in Escherichia coli possesses selective DNA cleaving activity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Substrate specificity of recombinant human immunodeficiency virus integrase protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Human immunodeficiency virus integrase protein requires a subterminal position of its viral DNA recognition sequence for efficient cleavage

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

DNA binding properties of the integrase proteins of human immunodeficiency viruses types 1 and 2

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Activities of human immunodeficiency virus (HIV) integration protein in vitro: specific cleavage and integration of HIV DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Reversal of Integration and DNA Splicing Mediated by Integrase of Human Immunodeficiency Virus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Structural implications of spectroscopic characterization of a putative zinc finger peptide from HIV-1 integrase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Mutational analysis of the integrase protein of human immunodeficiency virus type 2

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Identification of conserved amino acid residues critical for human immunodeficiency virus type 1 integrase function in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Residues critical for retroviral integrative recombination in a region that is highly conserved among retroviral/retrotransposon integrases and bacterial insertion sequence transposases

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Photo-cross-linking studies suggest a model for the architecture of an active human immunodeficiency virus type 1 integrase-DNA complex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Mapping Features of HIV-1 Integrase Near Selected Sites on Viral and Target DNA Molecules in an Active Enzyme−DNA Complex by Photo-Cross-Linking

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Central core domain of retroviral integrase is responsible for target site selection

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Disruption of the terminal base pairs of retroviral DNA during integration

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

Tn552, a novel transposable element from Staphylococcus aureus

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170911

A soluble active mutant of HIV-1 integrase: involvement of both the core and carboxyl-terminal domains in multimerization

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9755183

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/EMBOJ/17.19.5832

1 reference

29 July 2017

1 reference

29 July 2017

1 reference