Empirical establishment of oligonucleotide probe design criteria (Q33884644)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16000786 AND SRC:MED&resulttype=core&format=json

30 December 2019

title

Empirical establishment of oligonucleotide probe design criteria (English)

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30 December 2019

1

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30 December 2019

5

Jizhong Zhou

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30 December 2019

4

Matthew W Fields

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30 December 2019

2

Liyou Wu

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30 December 2019

author name string

Xingyuan Li

series ordinal

3

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30 December 2019

language of work or name

English

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publication date

1 July 2005

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Applied and Environmental Microbiology

30 December 2019

published in

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30 December 2019

volume

71

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30 December 2019

issue

7

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30 December 2019

page(s)

3753-3760

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Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays

30 December 2019

cites work

1 reference

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Microarrays for bacterial detection and microbial community analysis

5 July 2018

1 reference

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Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays

5 July 2018

1 reference

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OligoArray 2.0: design of oligonucleotide probes for DNA microarrays using a thermodynamic approach

5 July 2018

1 reference

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Transcriptome dynamics of Deinococcus radiodurans recovering from ionizing radiation

5 July 2018

1 reference

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Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment.

5 July 2018

1 reference

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Medical applications of microarray technologies: a regulatory science perspective

5 July 2018

1 reference

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Optimization of oligonucleotide-based DNA microarrays.

5 July 2018

1 reference

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Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

5 July 2018

1 reference

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DNA microarray technology and antimicrobial drug discovery

5 July 2018

1 reference

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Experimental annotation of the human genome using microarray technology

5 July 2018

1 reference

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Assessment of the sensitivity and specificity of oligonucleotide (50mer) microarrays

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Functional discovery via a compendium of expression profiles

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Genome-wide expression profiling in Escherichia coli K-12

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Expression monitoring by hybridization to high-density oligonucleotide arrays

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Thermodynamics of internal C.T mismatches in DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Exploring the Metabolic and Genetic Control of Gene Expression on a Genomic Scale

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Improved predictions of secondary structures for RNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Thermodynamic study of internal loops in oligoribonucleotides: symmetric loops are more stable than asymmetric loops.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in environmental samples

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Selection of oligonucleotide probes for protein coding sequences

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

PRIMEGENS: robust and efficient design of gene-specific probes for microarray analysis

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Fast evaluation of internal loops in RNA secondary structure prediction.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169010

Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G, and T.T mismatches

29 October 2018

1 reference

12 December 2020

OligoArray: genome-scale oligonucleotide design for microarrays

1 reference

12 December 2020

Getting the noise out of gene arrays

1 reference

12 December 2020

DNA recovery from soils of diverse composition.

1 reference

12 December 2020

Thermodynamics and NMR of Internal G·T Mismatches in DNA

1 reference

12 December 2020

Genome-wide expression monitoring in Saccharomyces cerevisiae

1 reference

12 December 2020

Nearest Neighbor Thermodynamic Parameters for Internal G·A Mismatches in DNA

1 reference

12 December 2020

Nearest-neighbor thermodynamics of internal A.C mismatches in DNA: sequence dependence and pH effects

1 reference

12 December 2020

10.1128/AEM.71.7.3753-3760.2005

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16000786 AND SRC:MED&resulttype=core&format=json

30 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16000786 AND SRC:MED&resulttype=core&format=json

30 December 2019

PubMed publication ID

16000786

1 reference