Estimation of alternative splicing isoform frequencies from RNA-Seq data (Q33876976)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21504602 AND SRC:MED&resulttype=core&format=json

29 January 2020

title

Estimation of alternative splicing isoform frequencies from RNA-Seq data (English)

1 reference

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29 January 2020

1 reference

alternative mRNA splicing, via spliceosome

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1 reference

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21504602 AND SRC:MED&resulttype=core&format=json

29 January 2020

Alexander Zelikovsky

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21504602 AND SRC:MED&resulttype=core&format=json

29 January 2020

author name string

Marius Nicolae

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21504602 AND SRC:MED&resulttype=core&format=json

29 January 2020

Serghei Mangul

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21504602 AND SRC:MED&resulttype=core&format=json

29 January 2020

publication date

19 April 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21504602 AND SRC:MED&resulttype=core&format=json

Algorithms for Molecular Biology

29 January 2020

published in

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29 January 2020

volume

6

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29 January 2020

issue

1

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29 January 2020

page(s)

9

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Creative Commons Attribution 2.0 Generic

29 January 2020

copyright license

start time

19 April 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

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Alternative expression analysis by RNA sequencing

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Towards reliable isoform quantification using RNA-SEQ data

5 July 2018

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

5 July 2018

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Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

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Biases in Illumina transcriptome sequencing caused by random hexamer priming

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Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments

5 July 2018

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5 July 2018

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The completion of the Mammalian Gene Collection (MGC).

5 July 2018

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Identifiability of isoform deconvolution from junction arrays and RNA-Seq.

5 July 2018

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Resolving deconvolution ambiguity in gene alternative splicing

5 July 2018

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De novo transcriptome assembly with ABySS.

5 July 2018

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Measuring differential gene expression by short read sequencing: quantitative comparison to 2-channel gene expression microarrays

5 July 2018

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Transcript length bias in RNA-seq data confounds systems biology

5 July 2018

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Continuous base identification for single-molecule nanopore DNA sequencing

5 July 2018

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TopHat: discovering splice junctions with RNA-Seq

5 July 2018

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

5 July 2018

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Statistical inferences for isoform expression in RNA-Seq

5 July 2018

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Parallel short sequence assembly of transcriptomes

5 July 2018

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Real-time DNA sequencing from single polymerase molecules

5 July 2018

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RNA-Seq: a revolutionary tool for transcriptomics

5 July 2018

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Alternative isoform regulation in human tissue transcriptomes

5 July 2018

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A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome

5 July 2018

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

5 July 2018

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SPACE: an algorithm to predict and quantify alternatively spliced isoforms using microarrays.

5 July 2018

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The transcriptional landscape of the mammalian genome

5 July 2018

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5 July 2018

Identifiers

DOI

10.1186/1748-7188-6-9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21504602 AND SRC:MED&resulttype=core&format=json

journals/almob/NicolaeMMZ11

29 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1 reference

https://scigraph.springernature.com/pub.10.1186/1748-7188-6-9

9 September 2019

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21504602 AND SRC:MED&resulttype=core&format=json

29 January 2020

PubMed publication ID

21504602

1 reference