An intermolecular base triple as the basis of ligand specificity and affinity in the guanine- and adenine-sensing riboswitch RNAs (Q33818066)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15665103 AND SRC:MED&resulttype=core&format=json

7 January 2020

title

An intermolecular base triple as the basis of ligand specificity and affinity in the guanine- and adenine-sensing riboswitch RNAs (English)

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7 January 2020

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5

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7 January 2020

author name string

Jonas Noeske

1

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7 January 2020

Christian Richter

2

1 reference

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7 January 2020

Marc A Grundl

3

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7 January 2020

Hamid R Nasiri

4

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7 January 2020

Jens Wöhnert

6

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7 January 2020

language of work or name

English

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publication date

21 January 2005

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Proceedings of the National Academy of Sciences of the United States of America

7 January 2020

published in

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7 January 2020

volume

102

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7 January 2020

issue

5

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7 January 2020

page(s)

1372-1377

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The program XEASY for computer-supported NMR spectral analysis of biological macromolecules

7 January 2020

cites work

1 reference

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Structural basis for discriminative regulation of gene expression by adenine- and guanine-sensing mRNAs

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

Structure of a natural guanine-responsive riboswitch complexed with the metabolite hypoxanthine

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

Gene regulation by riboswitches

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

Regulation of gene expression by effectors that bind to RNA.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

NMR structure of the 101-nucleotide core encapsidation signal of the Moloney murine leukemia virus

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

The riboswitch control of bacterial metabolism

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

Adenine riboswitches and gene activation by disruption of a transcription terminator

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

The annealing mechanism of HIV-1 reverse transcription primer onto the viral genome

4 July 2018

1 reference

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4 July 2018

NMR spectroscopy of RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

Metabolite-binding RNA domains are present in the genes of eukaryotes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

CRINEPT-TROSY NMR reveals p53 core domain bound in an unfolded form to the chaperone Hsp90.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

NMR analysis of a 900K GroEL GroES complex

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

Determination of internucleotide (h)J(HN) couplings by the modified 2D J(NN)-correlated [(15)N, (1)H] TROSY.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

NMR scalar couplings across Watson-Crick base pair hydrogen bonds in DNA observed by transverse relaxation-optimized spectroscopy

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

The NMR structure of Escherichia coli ribosomal protein L25 shows homology to general stress proteins and glutaminyl-tRNA synthetases.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

An RNA aptamer to the xanthine/guanine base with a distinctive mode of purine recognition

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

Solution structure of an ATP-binding RNA aptamer reveals a novel fold.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

Structural basis of RNA folding and recognition in an AMP-RNA aptamer complex

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

RNAs with dual specificity and dual RNAs with similar specificity

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547832

NMR study of 100 kDa HCV IRES RNA using segmental isotope labeling

4 July 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0406347102

TROSY-NMR studies of the 91kDa TRAP protein reveal allosteric control of a gene regulatory protein by ligand-altered flexibility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0406347102

Structural Characterization of the 69 Nucleotide Potato Spindle Tuber Viroid Left-terminal Domain by NMR and Thermodynamic Analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0406347102

The importance of not saturating water in protein NMR. Application to sensitivity enhancement and NOE measurements

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0406347102

Characterization of the hydrogen bond network in guanosine quartets by internucleotide 3hJ(NC)' and 2hJ(NN) scalar couplings

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0406347102

Nitrogen-15 nuclear magnetic resonance spectroscopy of some nucleosides and nucleotides

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15665103

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0406347102

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15665103 AND SRC:MED&resulttype=core&format=json

7 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15665103 AND SRC:MED&resulttype=core&format=json

7 January 2020

PubMed publication ID

15665103

1 reference