Long-distance chromatin mechanisms controlling tissue-specific gene locus activation. (Q33778352)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10570956 AND SRC:MED&resulttype=core&format=json

2 November 2019

review article

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title

Long-distance chromatin mechanisms controlling tissue-specific gene locus activation (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10570956 AND SRC:MED&resulttype=core&format=json

2 November 2019

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10570956 AND SRC:MED&resulttype=core&format=json

2 November 2019

author name string

Bonifer C

series ordinal

1

1 reference

29 July 2017

language of work or name

English

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publication date

1 October 1999

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10570956 AND SRC:MED&resulttype=core&format=json

2 November 2019

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10570956 AND SRC:MED&resulttype=core&format=json

2 November 2019

volume

238

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10570956 AND SRC:MED&resulttype=core&format=json

2 November 2019

issue

2

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2 November 2019

page(s)

277-289

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DNase I sensitive domain of the gene coding for the glycolytic enzyme glyceraldehyde-3-phosphate dehydrogenase

2 November 2019

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The promoter and enhancer of the inactive chicken beta-globin gene contains precisely positioned nucleosomes

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Hypersensitive site 2 specifies a unique function within the human beta-globin locus control region to stimulate globin gene transcription

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Synthetic human beta-globin 5'HS2 constructs function as locus control regions only in multicopy transgene concatamers.

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The beta-globin LCR is not necessary for an open chromatin structure or developmentally regulated transcription of the native mouse beta-globin locus.

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Structural and functional requirements for the chromatin transition at the PHO5 promoter in Saccharomyces cerevisiae upon PHO5 activation

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Locus control region function and heterochromatin-induced position effect variegation

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The relationship between chromosome structure and function at a human telomeric region

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A deletion of the human beta-globin locus activation region causes a major alteration in chromatin structure and replication across the entire beta-globin locus.

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7 January 2021

A developmentally stable chromatin structure in the human beta-globin gene cluster

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7 January 2021

Evidence for a locus activation region: the formation of developmentally stable hypersensitive sites in globin-expressing hybrids

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DNaseI hypersensitive sites 1, 2 and 3 of the human beta-globin dominant control region direct position-independent expression

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Each hypersensitive site of the human beta-globin locus control region confers a different developmental pattern of expression on the globin genes.

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Locus control regions, chromatin activation and transcription

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Chromatin remodelling by the glucocorticoid receptor requires the BRG1 complex

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Globin gene expression is reprogrammed in chimeras generated by injecting adult hematopoietic stem cells into mouse blastocysts

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7 January 2021

LEF-1 contains an activation domain that stimulates transcription only in a specific context of factor-binding sites.

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Absence of Gcn5 HAT activity defines a novel state in the opening of chromatin at the PHO5 promoter in yeast

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7 January 2021

Nuclease hypersensitive sites in chromatin

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HMG domain proteins: architectural elements in the assembly of nucleoprotein structures

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Position-independent, high-level expression of the human beta-globin gene in transgenic mice

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Activation of p53 Sequence-Specific DNA Binding by Acetylation of the p53 C-Terminal Domain

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The beta-globin locus control region enhances transcription of but does not confer position-independent expression onto the lacZ gene in transgenic mice.

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7 January 2021

Diversity of alpha-fetoprotein gene expression in mice is generated by a combination of separate enhancer elements

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Importance of globin gene order for correct developmental expression.

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Long Human–Mouse Sequence Alignments Reveal Novel Regulatory Elements: A Reason to Sequence the Mouse Genome

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Histone deacetylase activity is required for full transcriptional repression by mSin3A

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Core histone hyperacetylation co-maps with generalized DNase I sensitivity in the chicken beta-globin chromosomal domain.

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Position-effect variegation after 60 years

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A major positive regulatory region located far upstream of the human alpha-globin gene locus

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Chromosomal position effects in chicken lysozyme gene transgenic mice are correlated with suppression of DNase I hypersensitive site formation

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7 January 2021

Genomic position effects lead to an inefficient reorganization of nucleosomes in the 5'-regulatory region of the chicken lysozyme locus in transgenic mice

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7 January 2021

The developmental activation of the chicken lysozyme locus in transgenic mice requires the interaction of a subset of enhancer elements with the promoter

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7 January 2021

Globin gene switching. In vivo protein-DNA interactions of the human beta-globin locus in erythroid cells expressing the fetal or the adult globin gene program

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7 January 2021

Role of positive and negative cis-regulatory elements in the transcriptional activation of the lysozyme locus in developing macrophages of transgenic mice.

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7 January 2021

The DNase I sensitive domain of the chicken lysozyme gene spans 24 kb

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7 January 2021

Activation of the beta-globin locus control region precedes commitment to the erythroid lineage

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7 January 2021

Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription

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7 January 2021

Targeted recruitment of the Sin3-Rpd3 histone deacetylase complex generates a highly localized domain of repressed chromatin in vivo

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7 January 2021

Transcription Factor-Specific Requirements for Coactivators and Their Acetyltransferase Functions

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7 January 2021

The -3.9 kb DNaseI hypersensitive site of the chicken lysozyme locus harbours an enhancer with unusual chromatin reorganizing activity.

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7 January 2021

Long-distance transcriptional enhancement by the histone acetyltransferase PCAF.

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7 January 2021

Histone deacetylases associated with the mSin3 corepressor mediate mad transcriptional repression

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7 January 2021

Steroid-selective initiation of chromatin remodeling and transcriptional activation of the mouse mammary tumor virus promoter is controlled by the site of promoter integration

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7 January 2021

Deoxyribonuclease I sensitivity of the nontranscribed sequences flanking the 5' and 3' ends of the ovomucoid gene and the ovalbumin and its related X and Y genes in hen oviduct nuclei

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7 January 2021

A positive role for histone acetylation in transcription factor access to nucleosomal DNA

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7 January 2021

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7 January 2021

DNA sequence encodes information for nucleosome array formation

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Promoter specificity mediates the independent regulation of neighboring genes

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Adjacent DNA elements dominantly restrict the ubiquitous activity of a novel chromatin-opening region to specific tissues

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Persistent site-specific remodeling of a nucleosome array by transient action of the SWI/SNF complex.

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Virus infection leads to localized hyperacetylation of histones H3 and H4 at the IFN-beta promoter

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Long-range disruption of gene expression by a selectable marker cassette

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7 January 2021

Multiple control elements are required for expression of the human CD34 gene.

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7 January 2021

Mutations in both the structured domain and N-terminus of histone H2B bypass the requirement for Swi-Snf in yeast

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7 January 2021

The locus control region is necessary for gene expression in the human beta-globin locus but not the maintenance of an open chromatin structure in erythroid cells

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7 January 2021

Function of the upstream hypersensitive sites of the chicken beta-globin gene cluster in mice.

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7 January 2021

Transcriptional repression by UME6 involves deacetylation of lysine 5 of histone H4 by RPD3.

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7 January 2021

SWI-SNF Complex Participation in Transcriptional Activation at a Step Subsequent to Activator Binding

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7 January 2021

Substitution of the human beta-spectrin promoter for the human agamma-globin promoter prevents silencing of a linked human beta-globin gene in transgenic mice

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7 January 2021

Analysis of mice with single and multiple copies of transgenes reveals a novel arrangement for the lambda5-VpreB1 locus control region

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7 January 2021

A yeast artificial chromosome covering the tyrosinase gene confers copy number-dependent expression in transgenic mice

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7 January 2021

Human SWI/SNF interconverts a nucleosome between its base state and a stable remodeled state

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7 January 2021

Chromatin domains constitute regulatory units for the control of eukaryotic genes

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7 January 2021

Transcriptional regulation of mammalian genes in vivo. A tale of two templates

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7 January 2021

Differential activity of progesterone and glucocorticoid receptors on mouse mammary tumor virus templates differing in chromatin structure

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7 January 2021

Established epigenetic modifications determine the expression of developmentally regulated globin genes in somatic cell hybrids

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7 January 2021

Cell type-specific interactions of transcription factors with a housekeeping promoter in vivo

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7 January 2021

Germ line transmission of a yeast artificial chromosome spanning the murine alpha 1(I) collagen locus

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7 January 2021

Histone acetylation and transcriptional regulatory mechanisms

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7 January 2021

Characterization of deoxyribonucleic acid sequences at the 5' and 3' borders of the 100-kilobase pair ovalbumin gene domain

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7 January 2021

Effects of altered gene order or orientation of the locus control region on human beta-globin gene expression in mice.

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https://api.crossref.org/works/10.1016/S0378-1119(99)00340-6

7 January 2021

Facilitated binding of GAL4 and heat shock factor to nucleosomal templates: differential function of DNA-binding domains

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7 January 2021

Virus induction of human IFN beta gene expression requires the assembly of an enhanceosome

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7 January 2021

Histone H3 amino terminus is required for telomeric and silent mating locus repression in yeast

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7 January 2021

Transcriptional activators direct histone acetyltransferase complexes to nucleosomes

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7 January 2021

Acetylation of histone H4 plays a primary role in enhancing transcription factor binding to nucleosomal DNA in vitro.

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7 January 2021

Cis-acting sequences regulating expression of the human alpha-globin cluster lie within constitutively open chromatin

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7 January 2021

Chromatin remodeling by GAGA factor and heat shock factor at the hypersensitive Drosophila hsp26 promoter in vitro.

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7 January 2021

Position effect variegation in Drosophila is associated with an altered chromatin structure.

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7 January 2021

Enhancers increase the probability but not the level of gene expression

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7 January 2021

Transcriptional enhancers act in cis to suppress position-effect variegation

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https://api.crossref.org/works/10.1016/S0378-1119(99)00340-6

7 January 2021

Transcription complex stability and chromatin dynamics in vivo

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7 January 2021

Pituitary-specific chromatin structure of the rat prolactin distal enhancer element

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7 January 2021

Position effects on eukaryotic gene expression

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7 January 2021

RNA polymerase II holoenzyme contains SWI/SNF regulators involved in chromatin remodeling

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7 January 2021

Distinct requirements for chromatin assembly in transcriptional repression by thyroid hormone receptor and histone deacetylase.

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7 January 2021

NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities

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7 January 2021

Acetylation and modulation of erythroid Krüppel-like factor (EKLF) activity by interaction with histone acetyltransferases

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https://api.crossref.org/works/10.1016/S0378-1119(99)00340-6

7 January 2021

Essential and redundant functions of histone acetylation revealed by mutation of target lysines and loss of the Gcn5p acetyltransferase

1 reference

https://api.crossref.org/works/10.1016/S0378-1119(99)00340-6

7 January 2021

10.1016/S0378-1119(99)00340-6

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10570956 AND SRC:MED&resulttype=core&format=json

2 November 2019

1 reference