A multiplex endpoint RT-PCR assay for quality assessment of RNA extracted from formalin-fixed paraffin-embedded tissues (Q33772894)

29 July 2017

title

A multiplex endpoint RT-PCR assay for quality assessment of RNA extracted from formalin-fixed paraffin-embedded tissues (English)

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29 July 2017

3

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29 July 2017

5

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29 July 2017

Thomas Mikeska

2

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Elena A Takano

series ordinal

1

object named as

Elena A Takano

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29 July 2017

David J Byrne

4

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29 July 2017

publication date

17 December 2010

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29 July 2017

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29 July 2017

volume

10

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29 July 2017

page(s)

89

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Gene expression profiling of formalin-fixed, paraffin-embedded familial breast tumours using the whole genome-DASL assay

29 July 2017

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4 July 2018

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Validation of a primer optimisation matrix to improve the performance of reverse transcription - quantitative real-time PCR assays

4 July 2018

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Selection of REFERENCE genes for normalization of qRT-PCR data derived from FFPE breast tumors

4 July 2018

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Microarray analysis of RNA extracted from formalin-fixed, paraffin-embedded and matched fresh-frozen ovarian adenocarcinomas

4 July 2018

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Selection of suitable housekeeping genes for expression analysis in glioblastoma using quantitative RT-PCR

4 July 2018

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4 July 2018

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4 July 2018

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RNA expression analysis from formalin fixed paraffin embedded tissues

4 July 2018

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Effects of processing delay, formalin fixation, and immunohistochemistry on RNA Recovery From Formalin-fixed Paraffin-embedded Tissue Sections.

4 July 2018

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RNA extraction from ten year old formalin-fixed paraffin-embedded breast cancer samples: a comparison of column purification and magnetic bead-based technologies

4 July 2018

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4 July 2018

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Determinants of RNA quality from FFPE samples

4 July 2018

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In search of suitable reference genes for gene expression studies of human renal cell carcinoma by real-time PCR.

4 July 2018

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Quantification of mRNA using real-time RT-PCR

4 July 2018

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RNA integrity and the effect on the real-time qRT-PCR performance

4 July 2018

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The RIN: an RNA integrity number for assigning integrity values to RNA measurements

4 July 2018

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Reliable gene expression measurements from degraded RNA by quantitative real-time PCR depend on short amplicons and a proper normalization

4 July 2018

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Towards standardization of RNA quality assessment using user-independent classifiers of microcapillary electrophoresis traces

4 July 2018

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A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer

4 July 2018

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Quantitative gene expression profiling in formalin-fixed, paraffin-embedded tissues using universal bead arrays

4 July 2018

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Guideline to reference gene selection for quantitative real-time PCR

4 July 2018

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Measurement of gene expression in archival paraffin-embedded tissues: development and performance of a 92-gene reverse transcriptase-polymerase chain reaction assay

4 July 2018

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Design and standardization of PCR primers and protocols for detection of clonal immunoglobulin and T-cell receptor gene recombinations in suspect lymphoproliferations: report of the BIOMED-2 Concerted Action BMH4-CT98-3936.

4 July 2018

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Archival fixed histologic and cytologic specimens including stained and unstained materials are amenable to RT-PCR.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3016381

Quantitative mRNA expression analysis from formalin-fixed, paraffin-embedded tissues using 5' nuclease quantitative reverse transcription-polymerase chain reaction

4 July 2018

1 reference

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Quantitative gene expression analysis in microdissected archival formalin-fixed and paraffin-embedded tumor tissue

4 July 2018

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Analysis of chemical modification of RNA from formalin-fixed samples and optimization of molecular biology applications for such samples

4 July 2018

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Detection of hepatitis C virus RNA using ligation-dependent polymerase chain reaction in formalin-fixed, paraffin-embedded liver tissues

4 July 2018

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Use of UV methods for measurement of protein and nucleic acid concentrations

4 July 2018

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Value of A260/A280 ratios for measurement of purity of nucleic acids

4 July 2018

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Validity of nucleic acid purities monitored by 260nm/280nm absorbance ratios

4 July 2018

1 reference

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Identification and validation of suitable endogenous reference genes for gene expression studies of human bladder cancer.

4 July 2018

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Gene expression studies in prostate cancer tissue: which reference gene should be selected for normalization?

30 October 2018

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Chipping away at the chip bias: RNA degradation in microarray analysis

30 October 2018

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RNA expression analysis of formalin-fixed paraffin-embedded tumors

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3016381

Analytical validation of the Oncotype DX genomic diagnostic test for recurrence prognosis and therapeutic response prediction in node-negative, estrogen receptor-positive breast cancer

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21162754

12 December 2020

inferred from PubMed ID database lookup

Effect of pH and ionic strength on the spectrophotometric assessment of nucleic acid purity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21162754

12 December 2020

inferred from PubMed ID database lookup

Selection of reference genes for real-time PCR in human hepatocellular carcinoma tissues

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21162754

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/1472-6750-10-89

1 reference

Dimensions Publication ID

29 July 2017

1034079092

0 references

Fatcat ID

release_k6v4diaycbd4vaido33y2udd7m

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/k6v4diaycbd4vaido33y2udd7m

24 November 2022

mapped directly with Wikidata item

PMC publication ID

3016381

1 reference

29 July 2017

1 reference