Structural and functional analysis of a 0.5-Mb chicken region orthologous to the imprinted mammalian Ascl2/Mash2-Igf2-H19 region (Q33596180)

28 July 2017

title

Structural and functional analysis of a 0.5-Mb chicken region orthologous to the imprinted mammalian Ascl2/Mash2-Igf2-H19 region (English)

1 reference

28 July 2017

6

Kazuho Ikeo

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28 July 2017

Takaaki Yokomine

1

1 reference

28 July 2017

Hisao Shirohzu

2

1 reference

28 July 2017

Wahyu Purbowasito

3

1 reference

28 July 2017

Atsushi Toyoda

4

1 reference

28 July 2017

Hisakazu Iwama

5

1 reference

28 July 2017

Tetsuya Hori

7

1 reference

28 July 2017

Shigeki Mizuno

8

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28 July 2017

Masaoki Tsudzuki

9

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28 July 2017

Yoh-ichi Matsuda

10

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28 July 2017

Masahira Hattori

11

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28 July 2017

Yoshiyuki Sakaki

12

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28 July 2017

Hiroyuki Sasaki

13

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28 July 2017

publication date

8 December 2004

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28 July 2017

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28 July 2017

volume

15

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28 July 2017

issue

1

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28 July 2017

page(s)

154-165

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Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting

28 July 2017

cites work

1 reference

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The potential role of gene duplications in the evolution of imprinting mechanisms

21 June 2018

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What good is genomic imprinting: the function of parent-specific gene expression

21 June 2018

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The chicken as a model for large-scale analysis of vertebrate gene function.

21 June 2018

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Regional loss of imprinting and growth deficiency in mice with a targeted deletion of KvDMR1

21 June 2018

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Chromatin modification and epigenetic reprogramming in mammalian development

21 June 2018

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The human ASCL2 gene escaping genomic imprinting and its expression pattern

21 June 2018

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An evolutionarily conserved putative insulator element near the 3' boundary of the imprinted Igf2/H19 domain

21 June 2018

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Regulation of DNA methylation of Rasgrf1.

21 June 2018

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CTCF, a candidate trans-acting factor for X-inactivation choice

21 June 2018

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An intragenic methylated region in the imprinted Igf2 gene augments transcription.

21 June 2018

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Imprint status of M6P/IGF2R and IGF2 in chickens

21 June 2018

1 reference

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An upstream repressor element plays a role in Igf2 imprinting

21 June 2018

1 reference

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Genomic imprinting: parental influence on the genome

21 June 2018

1 reference

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Sequence and comparative analysis of the mouse 1-megabase region orthologous to the human 11p15 imprinted domain

21 June 2018

1 reference

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Wpkci, encoding an altered form of PKCI, is conserved widely on the avian W chromosome and expressed in early female embryos: implication of its role in female sex determination

21 June 2018

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Targeted disruption of the human LIT1 locus defines a putative imprinting control element playing an essential role in Beckwith-Wiedemann syndrome

21 June 2018

1 reference

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A skeletal muscle-specific mouse Igf2 repressor lies 40 kb downstream of the gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Sequence conservation and variability of imprinting in the Beckwith-Wiedemann syndrome gene cluster in human and mouse

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

M6P/IGF2R imprinting evolution in mammals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

The DNA sequence of human chromosome 21

21 June 2018

1 reference

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Comparative genomic sequencing identifies novel tissue-specific enhancers and sequence elements for methylation-sensitive factors implicated in Igf2/H19 imprinting

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

PipMaker--a web server for aligning two genomic DNA sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Genomic imprinting: implications for human disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Tandem repeats finder: a program to analyze DNA sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Deletion of the H19 differentially methylated domain results in loss of imprinted expression of H19 and Igf2.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

The mouse Lsp1 and Tnnt3 genes are 4.3 kb apart on distal mouse chromosome 7.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Multiple Mechanisms Regulate Imprinting of the Mouse Distal Chromosome 7 Gene Cluster

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Cytosine methylation and the ecology of intragenomic parasites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Imprinting in clusters: lessons from Beckwith-Wiedemann syndrome

21 June 2018

1 reference

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A novel method for making nested deletions and its application for sequencing of a 300 kb region of human APP locus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Methylation and imprinting: from host defense to gene regulation?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Essential role of Mash-2 in extraembryonic development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Allele specific inactivation of insulin 1 and 2, in the mouse yolk sac, indicates imprinting

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Comparative analysis of Igf-2/H19 imprinted domain: identification of a highly conserved intergenic DNase I hypersensitive region.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Genomic imprinting of Mash2, a mouse gene required for trophoblast development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

An enhancer deletion affects both H19 and Igf2 expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Disruption of imprinting caused by deletion of the H19 gene region in mice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

CpG islands in vertebrate genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Differential imprinting and expression of maternal and paternal genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Genomic imprinting in mammalian development: a parental tug-of-war

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Identification of antisense transcripts of the chicken insulin-like growth factor-II gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

The product of the H19 gene may function as an RNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Genomic organization and chromosomal localization of the TAPA-1 gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

CpG islands as gene markers in the human genome.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Novel conserved elements upstream of the H19 gene are transcribed and act as mesodermal enhancers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Imprinting and the epigenetic asymmetry between parental genomes

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Sequence polymorphisms, allelic expression status and chromosome locations of the chicken IGF2 and MPR1 genes

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Comparative genome analysis of the mouse imprinted gene impact and its nonimprinted human homolog IMPACT: toward the structural basis for species-specific imprinting.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Deletion of a silencer element in Igf2 results in loss of imprinting independent of H19.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

The sins of the fathers and mothers: genomic imprinting in mammalian development

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Sequence of a 42-kb mouse region containing the imprinted H19 locus: identification of a novel muscle-specific transcription unit showing biallelic expression

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

Structure and expression of the mouse L23mrp gene downstream of the imprinted H19 gene: biallelic expression and lack of interaction with the H19 enhancers

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

cash4, a novel achaete-scute homolog induced by Hensen's node during generation of the posterior nervous system

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540284

A 210-kb segment of tandem repeats and retroelements located between imprinted subdomains of mouse distal chromosome 7

30 October 2018

1 reference

12 December 2020

A new lymphocyte-specific gene which encodes a putative Ca2 -binding protein is not expressed in transformed T lymphocyte lines

1 reference

12 December 2020

Allelic expression of IGF2 in marsupials and birds

1 reference

12 December 2020

Evidence that insulin is imprinted in the human yolk sac

1 reference

12 December 2020

Deletion of a nuclease-sensitive region between the Igf2 and H19 genes leads to Igf2 misregulation and increased adiposity

1 reference

12 December 2020

Genome imprinting and development in the mouse

1 reference

12 December 2020

Characteristics of imprinted genes

1 reference

12 December 2020

Identifiers

DOI

10.1101/GR.2609605

1 reference

release_2gb633irpvhwjoaevhrhyqzjfy

28 July 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/2gb633irpvhwjoaevhrhyqzjfy

24 November 2022

mapped directly with Wikidata item

PMC publication ID

540284

1 reference

28 July 2017

1 reference