Replisome dynamics and use of DNA trombone loops to bypass replication blocks. (Q33571008)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18931783 AND SRC:MED&resulttype=core&format=json

24 December 2019

review article

1 reference

title

Replisome dynamics and use of DNA trombone loops to bypass replication blocks (English)

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24 December 2019

2

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24 December 2019

author name string

Nina Y Yao

series ordinal

1

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24 December 2019

publication date

18 September 2008

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24 December 2019

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24 December 2019

volume

4

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24 December 2019

issue

11

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24 December 2019

page(s)

1075-1084

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DNA polymerases at the replication fork in eukaryotes

24 December 2019

cites work

1 reference

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Exchange of DNA polymerases at the replication fork of bacteriophage T7.

21 June 2018

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Replisome assembly and the direct restart of stalled replication forks

21 June 2018

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Proliferating cell nuclear antigen loaded onto double-stranded DNA: dynamics, minor groove interactions and functional implications.

21 June 2018

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DNA replication: keep moving and don't mind the gap.

21 June 2018

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Dynamics of loading the Escherichia coli DNA polymerase processivity clamp

21 June 2018

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Evolutionary relationships and structural mechanisms of AAA proteins

21 June 2018

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Mechanism of proliferating cell nuclear antigen clamp opening by replication factor C

21 June 2018

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21 June 2018

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DNA primase acts as a molecular brake in DNA replication

21 June 2018

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Specific amino acid residues in the beta sliding clamp establish a DNA polymerase usage hierarchy in Escherichia coli

21 June 2018

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Out-of-plane motions in open sliding clamps: molecular dynamics simulations of eukaryotic and archaeal proliferating cell nuclear antigen

21 June 2018

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Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis

21 June 2018

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Evolutionary clues to eukaryotic DNA clamp-loading mechanisms: analysis of the functional constraints imposed on replication factor C AAA ATPases

21 June 2018

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CELLULAR DNA REPLICASES: Components and Dynamics at the Replication Fork

21 June 2018

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Discontinuous or semi-discontinuous DNA replication in Escherichia coli?

21 June 2018

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Structural analysis of a eukaryotic sliding DNA clamp-clamp loader complex

21 June 2018

1 reference

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The dynamic processivity of the T4 DNA polymerase during replication

21 June 2018

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Structural basis for recruitment of translesion DNA polymerase Pol IV/DinB to the -clamp

21 June 2018

1 reference

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Uncoupling of leading- and lagging-strand DNA replication during lesion bypass in vivo

21 June 2018

1 reference

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Characterization of DNA synthesis catalyzed by bacteriophage T4 replication complexes reconstituted on synthetic circular substrates

21 June 2018

1 reference

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Error-prone repair DNA polymerases in prokaryotes and eukaryotes

21 June 2018

1 reference

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Clamp loaders and sliding clamps

21 June 2018

1 reference

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A universal protein-protein interaction motif in the eubacterial DNA replication and repair systems.

21 June 2018

1 reference

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Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III

21 June 2018

1 reference

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Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III

21 June 2018

1 reference

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Creating a dynamic picture of the sliding clamp during T4 DNA polymerase holoenzyme assembly by using fluorescence resonance energy transfer

21 June 2018

1 reference

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Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination

21 June 2018

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Tau binds and organizes Escherichia coli replication proteins through distinct domains. Domain III, shared by gamma and tau, binds delta delta ' and chi psi.

21 June 2018

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Two distinct triggers for cycling of the lagging strand polymerase at the replication fork

21 June 2018

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Characterization of bacteriophage T4-coordinated leading- and lagging-strand synthesis on a minicircle substrate

21 June 2018

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Single-molecule studies of the effect of template tension on T7 DNA polymerase activity.

21 June 2018

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Did DNA replication evolve twice independently?

21 June 2018

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The chi psi subunits of DNA polymerase III holoenzyme bind to single-stranded DNA-binding protein (SSB) and facilitate replication of an SSB-coated template

21 June 2018

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Structural and functional insights provided by crystal structures of DNA polymerases and their substrate complexes.

21 June 2018

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Structure of the C-terminal region of p21(WAF1/CIP1) complexed with human PCNA

21 June 2018

1 reference

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Coupling of a replicative polymerase and helicase: a tau-DnaB interaction mediates rapid replication fork movement

21 June 2018

1 reference

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The Escherichia coli DNA polymerase III holoenzyme contains both products of the dnaX gene, tau and gamma, but only tau is essential.

21 June 2018

1 reference

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An explanation for lagging strand replication: polymerase hopping among DNA sliding clamps.

21 June 2018

1 reference

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Sliding clamps of DNA polymerases

21 June 2018

1 reference

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Accessory proteins bind a primed template and mediate rapid cycling of DNA polymerase III holoenzyme from Escherichia coli

21 June 2018

1 reference

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DNA polymerase III holoenzyme of Escherichia coli. II. A novel complex including the gamma subunit essential for processive synthesis

21 June 2018

1 reference

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Purification of a cellular replication factor, RF-C, that is required for coordinated synthesis of leading and lagging strands during simian virus 40 DNA replication in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4011192

Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp

21 June 2018

1 reference

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DNA polymerase III of Escherichia coli. Purification and identification of subunits

21 June 2018

1 reference

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Characterization of a triple DNA polymerase replisome.

21 June 2018

1 reference

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Differential binding of Escherichia coli DNA polymerases to the beta-sliding clamp.

31 October 2018

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A function for the psi subunit in loading the Escherichia coli DNA polymerase sliding clamp.

31 October 2018

1 reference

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Crystal structure of the catalytic alpha subunit of E. coli replicative DNA polymerase III.

31 October 2018

1 reference

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Replication fork reactivation downstream of a blocked nascent leading strand

31 October 2018

1 reference

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A sliding-clamp toolbelt binds high- and low-fidelity DNA polymerases simultaneously.

31 October 2018

1 reference

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Functional uncoupling of twin polymerases: mechanism of polymerase dissociation from a lagging-strand block.

31 October 2018

1 reference

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Fate of DNA replication fork encountering a single DNA lesion during oriC plasmid DNA replication in vitro

31 October 2018

1 reference

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Analysis of a multicomponent thermostable DNA polymerase III replicase from an extreme thermophile.

31 October 2018

1 reference

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Lagging strand synthesis in coordinated DNA synthesis by bacteriophage t7 replication proteins

31 October 2018

1 reference

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Replisome assembly reveals the basis for asymmetric function in leading and lagging strand replication.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4011192

The delta subunit of DNA polymerase III holoenzyme serves as a sliding clamp unloader in Escherichia coli

31 October 2018

1 reference

12 December 2020

Efficient in vitro replication of double-stranded DNA templates by a purified T4 bacteriophage replication system

1 reference

12 December 2020

Multiple Mechanisms Control Chromosome Integrity after Replication Fork Uncoupling and Restart at Irreparable UV Lesions

1 reference

12 December 2020

The control mechanism for lagging strand polymerase recycling during bacteriophage T4 DNA replication

1 reference

12 December 2020

A coproofreading Zn(2 )-dependent exonuclease within a bacterial replicase

1 reference

12 December 2020

The structure of T. aquaticus DNA polymerase III is distinct from eukaryotic replicative DNA polymerases

1 reference

12 December 2020

The replication factor C clamp loader requires arginine finger sensors to drive DNA binding and proliferating cell nuclear antigen loading

1 reference

12 December 2020

Architecture of the bacteriophage T4 replication complex revealed with nanoscale biopointers

1 reference

12 December 2020

Replisome fate upon encountering a leading strand block and clearance from DNA by recombination proteins

1 reference

12 December 2020

Understanding how the replisome works

1 reference

12 December 2020

Identifiers

DOI

10.1039/B811097B

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18931783 AND SRC:MED&resulttype=core&format=json

24 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18931783 AND SRC:MED&resulttype=core&format=json

24 December 2019

PubMed publication ID

18931783

1 reference