Cryo-electron microscope tomography to study axonemal organization (Q33561471)

28 July 2017

title

Cryo-electron microscope tomography to study axonemal organization (English)

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28 July 2017

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Daniela Nicastro

1

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28 July 2017

publication date

1 December 2009

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28 July 2017

published in

Methods in Cell Biology

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28 July 2017

volume

91

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28 July 2017

page(s)

1-39

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Cryo-electron microscopy of viruses

28 July 2017

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Whole cell cryo-electron tomography reveals distinct disassembly intermediates of vaccinia virus

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Low-temperature preparation techniques for electron microscopy of biological specimens based on rapid freezing with liquid helium II

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7 January 2021

When cilia go bad: cilia defects and ciliopathies

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7 January 2021

Classification of cryo-electron sub-tomograms using constrained correlation

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7 January 2021

Identification of macromolecular complexes in cryoelectron tomograms of phantom cells

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Computational exploration of structural information from cryo-electron tomograms.

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7 January 2021

Noise Reduction in Electron Tomographic Reconstructions Using Nonlinear Anisotropic Diffusion

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7 January 2021

Segmentation of two- and three-dimensional data from electron microscopy using eigenvector analysis.

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7 January 2021

Averaging of low exposure electron micrographs of non-periodic objects

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SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields

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7 January 2021

Components of a "dynein regulatory complex" are located at the junction between the radial spokes and the dynein arms in Chlamydomonas flagella

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7 January 2021

Segmentation of electron tomographic data sets using fuzzy set theory principles

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7 January 2021

The vertebrate primary cilium in development, homeostasis, and disease

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7 January 2021

STUDIES ON THE PROTEIN COMPONENTS OF CILIA FROM TETRAHYMENA PYRIFORMIS

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7 January 2021

Transient flagellar waveforms during intermittent swimming in sea urchin sperm. II. Analysis of tubule sliding

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7 January 2021

On flagellar structure in certain flagellates

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7 January 2021

Dynein: A Protein with Adenosine Triphosphatase Activity from Cilia

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7 January 2021

Tangible interfaces for structural molecular biology.

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7 January 2021

Cytochrome f and plastocyanin: their sequence in the photosynthetic electron transport chain of Chlamydomonas reinhardi

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7 January 2021

Energy filtered electron tomography of ice-embedded actin and vesicles

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7 January 2021

Determination of the inelastic mean free path in ice by examination of tilted vesicles and automated most probable loss imaging

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7 January 2021

Three-dimensional structure of herpes simplex virus from cryo-electron tomography

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7 January 2021

The kinetic cycles of myosin, kinesin, and dynein

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7 January 2021

3-D ultrastructure of O. tauri: electron cryotomography of an entire eukaryotic cell

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7 January 2021

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7 January 2021

Electron microscopy of microtubule-based cytoskeletal machinery

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7 January 2021

Outer doublet heterogeneity reveals structural polarity related to beat direction in Chlamydomonas flagella

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7 January 2021

Computerized transverse axial scanning (tomography). 1. Description of system

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7 January 2021

The structure of isolated Synechococcus strain WH8102 carboxysomes as revealed by electron cryotomography

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7 January 2021

The architecture of outer dynein arms in situ

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7 January 2021

Native cellular architecture of Treponema denticola revealed by cryo-electron tomography.

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7 January 2021

Applications of a bilateral denoising filter in biological electron microscopy

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7 January 2021

Collapse phenomena in freeze-drying

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7 January 2021

Perspectives of molecular and cellular electron tomography

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7 January 2021

Computer visualization of three-dimensional image data using IMOD

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7 January 2021

Cryo-electron tomography reveals the cytoskeletal structure of Spiroplasma melliferum

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7 January 2021

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7 January 2021

Template matching as a tool for annotation of tomograms of stained biological structures

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7 January 2021

Structural studies by electron tomography: from cells to molecules

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7 January 2021

Three-dimensional reconstruction of axonemal outer dynein arms in situ by electron tomography.

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7 January 2021

Optimizing phase contrast in transmission electron microscopy with an electrostatic (Boersch) phase plate

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7 January 2021

Cytoplasmic dynein functions as a gear in response to load

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7 January 2021

3D reconstruction in electron microscopy using ART with smooth spherically symmetric volume elements (blobs).

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7 January 2021

Dual-Axis Tomography: An Approach with Alignment Methods That Preserve Resolution

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7 January 2021

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7 January 2021

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7 January 2021

Arrangement of inner dynein arms in wild-type and mutant flagella of Chlamydomonas

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

Macromolecular Architecture in Eukaryotic Cells Visualized by Cryoelectron Tomography

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7 January 2021

Active pixel sensor array as a detector for electron microscopy

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7 January 2021

Cell and molecular biology of flagellar dyneins.

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7 January 2021

Dynein and kinesin share an overlapping microtubule-binding site

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7 January 2021

The influence of high pressure freezing on mammalian nerve tissue

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7 January 2021

In situ structure of the complete Treponema primitia flagellar motor

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7 January 2021

Electron microscopy of frozen hydrated eukaryotic flagella

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7 January 2021

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7 January 2021

Evaluation of denoising algorithms for biological electron tomography.

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7 January 2021

Cryo-electron tomography of neurospora mitochondria

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7 January 2021

3D structure of eukaryotic flagella in a quiescent state revealed by cryo-electron tomography

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7 January 2021

The molecular architecture of axonemes revealed by cryoelectron tomography

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7 January 2021

TOM software toolbox: acquisition and analysis for electron tomography.

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7 January 2021

Expedited approaches to whole cell electron tomography and organelle mark-up in situ in high-pressure frozen pancreatic islets

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7 January 2021

Understanding microtubule organizing centers by comparing mutant and wild-type structures with electron tomography

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7 January 2021

Proteomic analysis of a eukaryotic cilium

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7 January 2021

THE ULTRASTRUCTURE OF FLAGELLAR FIBRILS

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7 January 2021

Three-dimensional spectral signal-to-noise ratio for a class of reconstruction algorithms

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7 January 2021

Double-tilt electron tomography.

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7 January 2021

Three-dimensional reconstruction of single particles embedded in ice

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7 January 2021

Insights into the structural organization of the I1 inner arm dynein from a domain analysis of the 1beta dynein heavy chain

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7 January 2021

Genetic analysis of the cytoplasmic dynein subunit families

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7 January 2021

Axonemal dyneins: assembly, organization, and regulation

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7 January 2021

The 9 2 axoneme anchors multiple inner arm dyneins and a network of kinases and phosphatases that control motility

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7 January 2021

A new 3-D reconstruction scheme applied to the 50S ribosomal subunit of E. coli

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7 January 2021

Single-molecule analysis of dynein processivity and stepping behavior

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7 January 2021

Automatic acquisition of fiducial markers and alignment of images in tilt series for electron tomography.

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7 January 2021

AAA Ring and linker swing mechanism in the dynein motor

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7 January 2021

Morphology of rat exocrine pancreas prepared by anhydrous cryo-procedures

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7 January 2021

Processive bidirectional motion of dynein-dynactin complexes in vitro

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7 January 2021

The structural basis of actin filament branching by the Arp2/3 complex

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7 January 2021

The sup-pf-2 mutations of Chlamydomonas alter the activity of the outer dynein arms by modification of the gamma-dynein heavy chain

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7 January 2021

ALDEHYDE FIXATION FOR MORPHOLOGICAL AND ENZYME HISTOCHEMICAL STUDIES WITH THE ELECTRON MICROSCOPE

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7 January 2021

Design and regulation of the AAA microtubule motor dynein

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7 January 2021

Direction of active sliding of microtubules in Tetrahymena cilia

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7 January 2021

JUST (Java User Segmentation Tool) for semi-automatic segmentation of tomographic maps

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7 January 2021

25 Angstrom resolution structure of a cytoplasmic dynein motor reveals a seven-member planar ring

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7 January 2021

Segmentation of thin structures in electron micrographs using orientation fields

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7 January 2021

Studies on cilia. 3. Further studies on the cilium tip and a "sliding filament" model of ciliary motility

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7 January 2021

The generation of ciliary motion

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7 January 2021

The correlation averaging of a regularly arranged bacterial cell envelope protein

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7 January 2021

Three-dimensional reconstruction of imperfect two-dimensional crystals

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7 January 2021

Structure of Halothiobacillus neapolitanus carboxysomes by cryo-electron tomography

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7 January 2021

Allan Cormack--codeveloper of computed tomographic scanner

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7 January 2021

Head-head coordination is required for the processive motion of cytoplasmic dynein, an AAA molecular motor

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7 January 2021

Cilia and flagella revealed: from flagellar assembly in Chlamydomonas to human obesity disorders

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7 January 2021

Electron microscopy of frozen-hydrated biological material

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7 January 2021

Denoising of Electron Tomographic Reconstructions Using Multiscale Transformations

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7 January 2021

Molecular architecture of axonemal microtubule doublets revealed by cryo-electron tomography

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7 January 2021

Fully automated, sequential tilt-series acquisition with Leginon

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7 January 2021

Adenosine Triphosphate-Induced Sliding of Tubules in Trypsin-Treated Flagella of Sea-Urchin Sperm

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7 January 2021

Electron Diffraction of Frozen, Hydrated Protein Crystals

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7 January 2021

Electron microscopy of frozen hydrated biological specimens

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7 January 2021

Improved DNA: liposome complexes for increased systemic delivery and gene expression

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7 January 2021

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7 January 2021

A new resolution criterion based on spectral signal-to-noise ratios

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7 January 2021

Dynein: An ancient motor protein involved in multiple modes of transport

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7 January 2021

Efficient automatic noise reduction of electron tomographic reconstructions based on iterative median filtering

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7 January 2021

Fourier shell correlation threshold criteria

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

A novel three-dimensional variant of the watershed transform for segmentation of electron density maps

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

Electron Tomography of Single Ice-Embedded Macromolecules: Three-Dimensional Alignment and Classification

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

3D reconstruction and processing of volumetric data in cryo-electron tomography.

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

Accurate marker-free alignment with simultaneous geometry determination and reconstruction of tilt series in electron tomography

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

Tomographic subvolume alignment and subvolume classification applied to myosin V and SIV envelope spikes

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

Isolation of Chlamydomonas flagella and flagellar axonemes

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

Chlamydomonas flagella. I. Isolation and electrophoretic analysis of microtubules, matrix, membranes, and mastigonemes

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

Electron cryotomography of immature HIV-1 virions reveals the structure of the CA and SP1 Gag shells

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

CTF determination and correction for low dose tomographic tilt series

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

Identification of dyneins that localize exclusively to the proximal portion of Chlamydomonas flagella.

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

UCSF tomography: an integrated software suite for real-time electron microscopic tomographic data collection, alignment, and reconstruction

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

Automated high-throughput electron tomography by pre-calibration of image shifts

1 reference

https://api.crossref.org/works/10.1016/S0091-679X(08)91001-3

7 January 2021

10.1016/S0091-679X(08)91001-3

Identifiers

DOI

1 reference

28 July 2017

1 reference