Using cell fate attractors to uncover transcriptional regulation of HL60 neutrophil differentiation (Q33410018)

26 July 2017

title

Using cell fate attractors to uncover transcriptional regulation of HL60 neutrophil differentiation (English)

1 reference

26 July 2017

5

Ilya Shmulevich

1 reference

26 July 2017

Albert C Huang

1

1 reference

26 July 2017

Limei Hu

series ordinal

2

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26 July 2017

Stuart A Kauffman

series ordinal

3

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26 July 2017

Wei Zhang

series ordinal

4

1 reference

26 July 2017

publication date

18 February 2009

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26 July 2017

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26 July 2017

volume

3

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26 July 2017

page(s)

20

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Transcriptome-wide noise controls lineage choice in mammalian progenitor cells

26 July 2017

cites work

1 reference

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Cdc20 and Cks direct the spindle checkpoint-independent destruction of cyclin A.

14 July 2018

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Uncovering a macrophage transcriptional program by integrating evidence from motif scanning and expression dynamics

14 July 2018

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NLRs at the intersection of cell death and immunity

14 July 2018

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A systems level analysis of transcriptional changes in Alzheimer's disease and normal aging

14 July 2018

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An essential role of sialylated O-linked sugar chains in the recognition of mouse CD99 by paired Ig-like type 2 receptor (PILR)

14 July 2018

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Dynamic simulation of regulatory networks using SQUAD

14 July 2018

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Multiscale models for vertebrate limb development

14 July 2018

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The acute-phase protein alpha 1-acid glycoprotein (AGP) induces rises in cytosolic Ca2 in neutrophil granulocytes via sialic acid binding immunoglobulin-like lectins (siglecs).

14 July 2018

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Regulation of centromeric cohesion by sororin independently of the APC/C

14 July 2018

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Sox9-dependent transcriptional regulation of the proprotein convertase furin

14 July 2018

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14 July 2018

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Spook and Spookier code for stage-specific components of the ecdysone biosynthetic pathway in Diptera

14 July 2018

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Pituitary transcription factors: from congenital deficiencies to gene therapy

14 July 2018

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Promoter hypermethylation silences expression of the HoxA4 gene and correlates with IgVh mutational status in CLL

14 July 2018

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Systems biology approaches identify ATF3 as a negative regulator of Toll-like receptor 4.

14 July 2018

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CUTL1 is phosphorylated by protein kinase A, modulating its effects on cell proliferation and motility

14 July 2018

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Multistable and multistep dynamics in neutrophil differentiation

14 July 2018

1 reference

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The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation

14 July 2018

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Cell tension, matrix mechanics, and cancer development

14 July 2018

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Hox regulation of normal and leukemic hematopoietic stem cells.

14 July 2018

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ASB2 is an Elongin BC-interacting protein that can assemble with Cullin 5 and Rbx1 to reconstitute an E3 ubiquitin ligase complex

14 July 2018

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Stem cell origin of cancer and differentiation therapy

14 July 2018

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MEIS 1 expression is downregulated through promoter hypermethylation in AML1-ETO acute myeloid leukemias.

14 July 2018

1 reference

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A dual role of cyclin E in cell proliferation and apoptosis may provide a target for cancer therapy

14 July 2018

1 reference

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GPI-80, a beta2 integrin associated glycosylphosphatidylinositol-anchored protein, concentrates on pseudopodia without association with beta2 integrin during neutrophil migration

14 July 2018

1 reference

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Human Mps1 protein kinase is required for centrosome duplication and normal mitotic progression

14 July 2018

1 reference

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STAT5 and Oct-1 form a stable complex that modulates cyclin D1 expression.

14 July 2018

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Localization of GPI-80, a beta2-integrin-associated glycosylphosphatidyl-inositol anchored protein, on strongly CD14-positive human monocytes

14 July 2018

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GoMiner: a resource for biological interpretation of genomic and proteomic data

14 July 2018

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E2A basic helix-loop-helix transcription factors in human leukemia

14 July 2018

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The critical regulator of embryonic hematopoiesis, SCL, is vital in the adult for megakaryopoiesis, erythropoiesis, and lineage choice in CFU-S12

14 July 2018

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

14 July 2018

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Core binding factor genes and human leukemia

14 July 2018

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Gene perturbation and intervention in probabilistic Boolean networks

14 July 2018

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Brn-1 and Brn-2 share crucial roles in the production and positioning of mouse neocortical neurons

14 July 2018

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The human genome browser at UCSC

14 July 2018

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Human Mps1 kinase is required for the spindle assembly checkpoint but not for centrosome duplication

14 July 2018

1 reference

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In vitro analyses of known and novel RUNX1/AML1 mutations in dominant familial platelet disorder with predisposition to acute myelogenous leukemia: implications for mechanisms of pathogenesis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652435

Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome

14 July 2018

1 reference

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Pax6 lights-up the way for eye development

14 July 2018

1 reference

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Meis1a suppresses differentiation by G-CSF and promotes proliferation by SCF: potential mechanisms of cooperativity with Hoxa9 in myeloid leukemia

14 July 2018

1 reference

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Significance analysis of microarrays applied to the ionizing radiation response

14 July 2018

1 reference

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AML1-ETO downregulates the granulocytic differentiation factor C/EBPalpha in t(8;21) myeloid leukemia.

14 July 2018

1 reference

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Dominant-negative mutations of CEBPA, encoding CCAAT/enhancer binding protein-alpha (C/EBPalpha), in acute myeloid leukemia

14 July 2018

1 reference

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Defining roles for HOX and MEIS1 genes in induction of acute myeloid leukemia

14 July 2018

1 reference

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Shape-dependent control of cell growth, differentiation, and apoptosis: switching between attractors in cell regulatory networks

14 July 2018

1 reference

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The Rab6-binding kinesin, Rab6-KIFL, is required for cytokinesis

14 July 2018

1 reference

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Adult rat and human bone marrow stromal cells differentiate into neurons

14 July 2018

1 reference

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Gene ontology: tool for the unification of biology

14 July 2018

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Deconstructing a disease: RARalpha, its fusion partners, and their roles in the pathogenesis of acute promyelocytic leukemia

14 July 2018

1 reference

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The SCL gene: from case report to critical hematopoietic regulator.

14 July 2018

1 reference

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Modulation of cell proliferation and differentiation through substrate-dependent changes in fibronectin conformation

14 July 2018

1 reference

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Cloning and characterization of AFX, the gene that fuses to MLL in acute leukemias with a t(X;11)(q13;q23)

14 July 2018

1 reference

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Isologous diversification: a theory of cell differentiation.

14 July 2018

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Absence of fetal liver hematopoiesis in mice deficient in transcriptional coactivator core binding factor beta

14 July 2018

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TRANSFAC: a database on transcription factors and their DNA binding sites

14 July 2018

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AML1, the target of multiple chromosomal translocations in human leukemia, is essential for normal fetal liver hematopoiesis

14 July 2018

1 reference

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Functional interactions of the retinoblastoma protein with mammalian D-type cyclins

14 July 2018

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The TATA-binding protein: a general transcription factor in eukaryotes and archaebacteria

14 July 2018

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The effects of benzene and hydroquinone on myeloid differentiation of HL-60 promyelocytic leukemia cells

14 July 2018

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Genistein as an inducer of tumor cell differentiation: possible mechanisms of action

14 July 2018

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Dimethyl sulphoxide: a review of its applications in cell biology.

14 July 2018

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Cellular origin of cancer: dedifferentiation or stem cell maturation arrest?

14 July 2018

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Induction of differentiation of the human promyelocytic leukemia cell line (HL-60) by retinoic acid

14 July 2018

1 reference

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Metabolic stability and epigenesis in randomly constructed genetic nets

14 July 2018

1 reference

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Genetic control of the cell-division cycle in yeast. I. Detection of mutants

14 July 2018

1 reference

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Control of cell differentiation during proliferation. II. Myeloid differentiation and cell cycle arrest of HL-60 promyelocytes preceded by nuclear structural changes

14 July 2018

1 reference

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The mammalian cdc2 protein kinase: mechanisms of regulation during the cell cycle

14 July 2018

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Site-specific recombination of the tal-1 gene is a common occurrence in human T cell leukemia

14 July 2018

1 reference

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Genomic organization, chromosomal localization, and independent expression of human cyclin D genes

14 July 2018

1 reference

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Characterization of the continuous, differentiating myeloid cell line (HL-60) from a patient with acute promyelocytic leukemia

14 July 2018

1 reference

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Human promyelocytic leukemia cells in culture differentiate into macrophage-like cells when treated with a phorbol diester

14 July 2018

1 reference

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Terminal differentiation of human promyelocytic leukemia cells induced by dimethyl sulfoxide and other polar compounds

14 July 2018

1 reference

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A predictive model for transcriptional control of physiology in a free living cell.

14 July 2018

1 reference

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Cancer onset and progression: a genome-wide, nonlinear dynamical systems perspective on onconetworks

31 October 2018

1 reference

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Hypercalcemia in childhood acute lymphoblastic leukemia: frequent implication of parathyroid hormone-related peptide and E2A-HLF from translocation 17;19.

31 October 2018

1 reference

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Cdc7 is an active kinase in human cancer cells undergoing replication stress.

31 October 2018

1 reference

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Aberrant promoter methylation of the retinoic acid receptor alpha gene in acute promyelocytic leukemia

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652435

Roles of polo-like kinase 1 in the assembly of functional mitotic spindles

31 October 2018

1 reference

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External control in Markovian genetic regulatory networks: the imperfect information case

31 October 2018

1 reference

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Characterization of the molecular interactions of interleukin-8 (CXCL8), growth related oncogen alpha (CXCL1) and a non-peptide antagonist (SB 225002) with the human CXCR2.

31 October 2018

1 reference

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Cell proliferation and CD11b expression are controlled independently during HL60 cell differentiation initiated by 1,25 alpha-dihydroxyvitamin D(3) or all-trans-retinoic acid.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652435

Ethanol exposure stimulates cartilage differentiation by embryonic limb mesenchyme cells

31 October 2018

1 reference

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Dependence of HL-60 myeloid cell differentiation on continuous and split retinoic acid exposures: precommitment memory associated with altered nuclear structure

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652435

Modeling of C/EBPα Mutant Acute Myeloid Leukemia Reveals a Common Expression Signature of Committed Myeloid Leukemia-Initiating Cells

31 October 2018

1 reference

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Malignant transformation of multipotent muscle-derived cells by concurrent differentiation signals

31 October 2018

1 reference

12 December 2020

C/EBPalpha in leukemogenesis: a matter of being in the right place with the right signals

1 reference

12 December 2020

E2A/HLF fusion cDNAs and the use of RT-PCR for the detection of minimal residual disease in t(17;19)(q22;p13) acute lymphoblastic leukemia

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12 December 2020

1,25-dihydroxyvitamin D3 inhibits proliferation of human promyelocytic leukaemia (HL60) cells and induces monocyte-macrophage differentiation in HL60 and normal human bone marrow cells

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12 December 2020

Membrane origin for a signal eliciting a program of cell differentiation

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12 December 2020

Biosynthetic (recombinant) human granulocyte-macrophage colony-stimulating factor: effect on normal bone marrow and leukemia cell lines

1 reference

12 December 2020

Dynamical systems basis of metamorphosis: diversity and plasticity of cellular states in reaction diffusion network

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12 December 2020

Cell fates as high-dimensional attractor states of a complex gene regulatory network

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12 December 2020

A network model for the control of the differentiation process in Th cells

1 reference

12 December 2020

Identifiers

DOI

10.1186/1752-0509-3-20

1 reference

journals/bmcsb/HuangHKZS09

26 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

26 July 2017

1 reference